Kinetic Studies on the 2-Oxoglutarate/Fe(II)-Dependent Nucleic Acid Modifying Enzymes from the AlkB and TET Families.

2-OG-dependent enzyme ALKBH protein AlkB FTO TET kinetics

Journal

DNA
ISSN: 2673-8856
Titre abrégé: DNA (Basel)
Pays: Switzerland
ID NLM: 9918284173306676

Informations de publication

Date de publication:
Jun 2023
Historique:
medline: 3 5 2024
pubmed: 3 5 2024
entrez: 3 5 2024
Statut: ppublish

Résumé

Nucleic acid methylations are important genetic and epigenetic biomarkers. The formation and removal of these markers is related to either methylation or demethylation. In this review, we focus on the demethylation or oxidative modification that is mediated by the 2-oxoglutarate (2-OG)/Fe(II)-dependent AlkB/TET family enzymes. In the catalytic process, most enzymes oxidize 2-OG to succinate, in the meantime oxidizing methyl to hydroxymethyl, leaving formaldehyde and generating demethylated base. The AlkB enzyme from

Identifiants

pubmed: 38698914
doi: 10.3390/dna3020005
pmc: PMC11065319
doi:

Types de publication

Journal Article

Langues

eng

Pagination

65-84

Déclaration de conflit d'intérêts

Conflicts of Interest: The authors declare no competing financial interests.

Auteurs

Zhiyuan Peng (Z)

Department of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, RI 02881, USA.

Jian Ma (J)

Department of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, RI 02881, USA.

Christo Z Christov (CZ)

Department of Chemistry, Michigan Technological University, Houghton, MI 49931, USA.

Tatyana Karabencheva-Christova (T)

Department of Chemistry, Michigan Technological University, Houghton, MI 49931, USA.

Nicolai Lehnert (N)

Department of Chemistry and Department of Biophysics, University of Michigan, Ann Arbor, MI 48109, USA.

Deyu Li (D)

Department of Biomedical and Pharmaceutical Sciences, College of Pharmacy, University of Rhode Island, Kingston, RI 02881, USA.

Classifications MeSH