Analysis of fungal diversity in the gut feces of wild takin (

Budorcas taxicolor ITS rRNA amplicon sequencing gut fungal diversity metagenomics opportunistic pathogenic fungi

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2024
Historique:
received: 31 01 2024
accepted: 08 04 2024
medline: 3 5 2024
pubmed: 3 5 2024
entrez: 3 5 2024
Statut: epublish

Résumé

The composition of the intestinal microbiome correlates significantly with an animal's health status. Hence, this indicator is highly important and sensitive for protecting endangered animals. However, data regarding the fungal diversity of the wild To ensure comprehensive data analyses, we collected 82 fecal samples from five geographical sites. Amplicon sequencing of the internal transcribed spacer (ITS) rRNA was used to assess fecal core microbiota and potential pathogens to determine whether the microflora composition is related to geographical location or diet. We further validated the ITS rRNA sequencing results via amplicon metagenomic sequencing and culturing of fecal fungi. The fungal diversity in the feces of wild

Identifiants

pubmed: 38699479
doi: 10.3389/fmicb.2024.1364486
pmc: PMC11063333
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1364486

Informations de copyright

Copyright © 2024 Ma, Li, Cai, Xiao, He, Liu, Chen, Wang, Shen and Gu.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Auteurs

Xiaoping Ma (X)

Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.

Zhiguo Li (Z)

Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.

Lijun Cai (L)

Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.
Management Office of Tangjiahe National Nature Reserve, Qingchuan, China.

Mei Xiao (M)

Management Office of Tangjiahe National Nature Reserve, Qingchuan, China.

Fang He (F)

Management Office of Tangjiahe National Nature Reserve, Qingchuan, China.

Zhen Liu (Z)

Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.

Dong Chen (D)

Sichuan Provincial Center for Animal Disease Prevention and Control, Chengdu, China.

Ya Wang (Y)

Key Laboratory of Animal Disease and Human Health of Sichuan Province, College of Veterinary Medicine, Sichuan Agricultural University, Chengdu, China.

Limin Shen (L)

Management Office of Tangjiahe National Nature Reserve, Qingchuan, China.

Yu Gu (Y)

College of Life Sciences, Sichuan Agricultural University, Chengdu, China.

Classifications MeSH