Analysis of fungal diversity in the gut feces of wild takin (
Budorcas taxicolor
ITS rRNA
amplicon sequencing
gut fungal diversity
metagenomics
opportunistic pathogenic fungi
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2024
2024
Historique:
received:
31
01
2024
accepted:
08
04
2024
medline:
3
5
2024
pubmed:
3
5
2024
entrez:
3
5
2024
Statut:
epublish
Résumé
The composition of the intestinal microbiome correlates significantly with an animal's health status. Hence, this indicator is highly important and sensitive for protecting endangered animals. However, data regarding the fungal diversity of the wild To ensure comprehensive data analyses, we collected 82 fecal samples from five geographical sites. Amplicon sequencing of the internal transcribed spacer (ITS) rRNA was used to assess fecal core microbiota and potential pathogens to determine whether the microflora composition is related to geographical location or diet. We further validated the ITS rRNA sequencing results via amplicon metagenomic sequencing and culturing of fecal fungi. The fungal diversity in the feces of wild
Identifiants
pubmed: 38699479
doi: 10.3389/fmicb.2024.1364486
pmc: PMC11063333
doi:
Types de publication
Journal Article
Langues
eng
Pagination
1364486Informations de copyright
Copyright © 2024 Ma, Li, Cai, Xiao, He, Liu, Chen, Wang, Shen and Gu.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.