Stress phenotyping analysis leveraging autofluorescence image sequences with machine learning.
Brassica rapa
autofluorescence imaging
drought stress
genotypic variation
high throughput plant phenotyping
machine learning-based classifier
stress detection
Journal
Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200
Informations de publication
Date de publication:
2024
2024
Historique:
received:
09
12
2023
accepted:
14
03
2024
medline:
6
5
2024
pubmed:
6
5
2024
entrez:
6
5
2024
Statut:
epublish
Résumé
Autofluorescence-based imaging has the potential to non-destructively characterize the biochemical and physiological properties of plants regulated by genotypes using optical properties of the tissue. A comparative study of stress tolerant and stress susceptible genotypes of Autofluorescence spectral images have been used to design a stress detection classifier with two classes, stressed and non-stressed, using machine learning algorithms. The benchmark dataset consisted of time-series image sequences from three The study demonstrated that both the computed phenotypes consistently discriminated against stressed Autofluorescence signals from the 365/400 nm excitation/emission combination were able to segregate genotypic variation during a progressive drought treatment under a controlled greenhouse environment, allowing for the exploration of other meaningful phenotypes using autofluorescence image sequences with significance in the context of plant science.
Sections du résumé
Background
UNASSIGNED
Autofluorescence-based imaging has the potential to non-destructively characterize the biochemical and physiological properties of plants regulated by genotypes using optical properties of the tissue. A comparative study of stress tolerant and stress susceptible genotypes of
Methods
UNASSIGNED
Autofluorescence spectral images have been used to design a stress detection classifier with two classes, stressed and non-stressed, using machine learning algorithms. The benchmark dataset consisted of time-series image sequences from three
Results
UNASSIGNED
The study demonstrated that both the computed phenotypes consistently discriminated against stressed
Conclusion
UNASSIGNED
Autofluorescence signals from the 365/400 nm excitation/emission combination were able to segregate genotypic variation during a progressive drought treatment under a controlled greenhouse environment, allowing for the exploration of other meaningful phenotypes using autofluorescence image sequences with significance in the context of plant science.
Identifiants
pubmed: 38708393
doi: 10.3389/fpls.2024.1353110
pmc: PMC11066247
doi:
Types de publication
Journal Article
Langues
eng
Pagination
1353110Informations de copyright
Copyright © 2024 Das Choudhury, Guadagno, Bashyam, Mazis, Ewers, Samal and Awada.
Déclaration de conflit d'intérêts
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.