Natural language processing augments comorbidity documentation in neurosurgical inpatient admissions.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 10 08 2022
accepted: 04 04 2024
medline: 10 5 2024
pubmed: 10 5 2024
entrez: 9 5 2024
Statut: epublish

Résumé

To establish whether or not a natural language processing technique could identify two common inpatient neurosurgical comorbidities using only text reports of inpatient head imaging. A training and testing dataset of reports of 979 CT or MRI scans of the brain for patients admitted to the neurosurgery service of a single hospital in June 2021 or to the Emergency Department between July 1-8, 2021, was identified. A variety of machine learning and deep learning algorithms utilizing natural language processing were trained on the training set (84% of the total cohort) and tested on the remaining images. A subset comparison cohort (n = 76) was then assessed to compare output of the best algorithm against real-life inpatient documentation. For "brain compression", a random forest classifier outperformed other candidate algorithms with an accuracy of 0.81 and area under the curve of 0.90 in the testing dataset. For "brain edema", a random forest classifier again outperformed other candidate algorithms with an accuracy of 0.92 and AUC of 0.94 in the testing dataset. In the provider comparison dataset, for "brain compression," the random forest algorithm demonstrated better accuracy (0.76 vs 0.70) and sensitivity (0.73 vs 0.43) than provider documentation. For "brain edema," the algorithm again demonstrated better accuracy (0.92 vs 0.84) and AUC (0.45 vs 0.09) than provider documentation. A natural language processing-based machine learning algorithm can reliably and reproducibly identify selected common neurosurgical comorbidities from radiology reports. This result may justify the use of machine learning-based decision support to augment provider documentation.

Identifiants

pubmed: 38723044
doi: 10.1371/journal.pone.0303519
pii: PONE-D-22-22485
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0303519

Informations de copyright

Copyright: © 2024 Sastry et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

Rahul A Sastry (RA)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Aayush Setty (A)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.
Department of Computer Science, Brown University, Providence, RI, United States of America.

David D Liu (DD)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Bryan Zheng (B)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Rohaid Ali (R)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Robert J Weil (RJ)

Department of Neurosurgery, Brain & Spine, Southcoast Health, Dartmouth, MA, United States of America.

G Dean Roye (GD)

Department of Surgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Curtis E Doberstein (CE)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Adetokunbo A Oyelese (AA)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Tianyi Niu (T)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Ziya L Gokaslan (ZL)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

Albert E Telfeian (AE)

Department of Neurosurgery, Warren Alpert Medical School, Rhode Island Hospital, Brown University, Providence, RI, United States of America.

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