Unlocking Preclinical Alzheimer's: A Multi-Year Label-Free In Vitro Raman Spectroscopy Study Empowered by Chemometrics.


Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
26 Apr 2024
Historique:
received: 08 04 2024
revised: 23 04 2024
accepted: 24 04 2024
medline: 11 5 2024
pubmed: 11 5 2024
entrez: 11 5 2024
Statut: epublish

Résumé

Alzheimer's disease is a progressive neurodegenerative disorder, the early detection of which is crucial for timely intervention and enrollment in clinical trials. However, the preclinical diagnosis of Alzheimer's encounters difficulties with gold-standard methods. The current definitive diagnosis of Alzheimer's still relies on expensive instrumentation and post-mortem histological examinations. Here, we explore label-free Raman spectroscopy with machine learning as an alternative to preclinical Alzheimer's diagnosis. A special feature of this study is the inclusion of patient samples from different cohorts, sampled and measured in different years. To develop reliable classification models, partial least squares discriminant analysis in combination with variable selection methods identified discriminative molecules, including nucleic acids, amino acids, proteins, and carbohydrates such as taurine/hypotaurine and guanine, when applied to Raman spectra taken from dried samples of cerebrospinal fluid. The robustness of the model is remarkable, as the discriminative molecules could be identified in different cohorts and years. A unified model notably classifies preclinical Alzheimer's, which is particularly surprising because of Raman spectroscopy's high sensitivity regarding different measurement conditions. The presented results demonstrate the capability of Raman spectroscopy to detect preclinical Alzheimer's disease for the first time and offer invaluable opportunities for future clinical applications and diagnostic methods.

Identifiants

pubmed: 38731955
pii: ijms25094737
doi: 10.3390/ijms25094737
pii:
doi:

Substances chimiques

Biomarkers 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : MICIU/AEI/10.13039/501100011033
ID : CEX2020-001038-M

Auteurs

Eneko Lopez (E)

CIC nanoGUNE BRTA, 20018 San Sebasián, Spain.
Department of Physics, University of the Basque Country (UPV/EHU), 20018 San Sebastián, Spain.

Jaione Etxebarria-Elezgarai (J)

CIC nanoGUNE BRTA, 20018 San Sebasián, Spain.

Maite García-Sebastián (M)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Miren Altuna (M)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Mirian Ecay-Torres (M)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Ainara Estanga (A)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Mikel Tainta (M)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Carolina López (C)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Pablo Martínez-Lage (P)

Center for Research and Advanced Therapies, CITA-Alzhéimer Foundation, 20009 San Sebastián, Spain.

Jose Manuel Amigo (JM)

IKERBASQUE, Basque Foundation for Science, 48009 Bilbao, Spain.
Department of Analytical Chemistry, University of the Basque Country, 48940 Leioa, Spain.

Andreas Seifert (A)

CIC nanoGUNE BRTA, 20018 San Sebasián, Spain.
IKERBASQUE, Basque Foundation for Science, 48009 Bilbao, Spain.

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