Implementing Evidence-Based Assertions of Clinical Actionability in the Context of Secondary Findings: Updates from the ClinGen Actionability Working Group.

Actionability assertions Assertions rubric Clinical actionability Genome sequencing Secondary findings

Journal

Genetics in medicine : official journal of the American College of Medical Genetics
ISSN: 1530-0366
Titre abrégé: Genet Med
Pays: United States
ID NLM: 9815831

Informations de publication

Date de publication:
14 May 2024
Historique:
received: 19 02 2024
revised: 07 05 2024
accepted: 08 05 2024
medline: 17 5 2024
pubmed: 17 5 2024
entrez: 17 5 2024
Statut: aheadofprint

Résumé

The ClinGen Actionability Working Group (AWG) developed an evidence-based framework to generate actionability reports and scores of gene-condition pairs in the context of secondary findings from genome sequencing. Here we describe the expansion of the framework to include actionability assertions. Initial development of the actionability rubric was based on previously scored adult gene-condition pairs and individual expert evaluation. Rubric refinement was iterative and based on evaluation, feedback, and discussion. The final rubric was pragmatically evaluated via integration into actionability assessments for 27 gene-condition pairs. The resulting rubric has a four-point scale (limited, moderate, strong, definitive) and uses the highest-scoring outcome-intervention pair of each gene-condition pair to generate a preliminary assertion. During AWG discussions, pre-defined criteria and factors guide discussion to produce a consensus assertion for a gene-condition pair, which may differ from the preliminary assertion. The AWG has retrospectively generated assertions for all previously scored gene-condition pairs and are prospectively asserting on gene-condition pairs under assessment, having completed over 170 adult and 188 pediatric gene-condition pairs. The AWG expanded its framework to provide actionability assertions to enhance the clinical value of their resources and increase their utility as decision aids regarding return of secondary findings.

Identifiants

pubmed: 38757444
pii: S1098-3600(24)00098-4
doi: 10.1016/j.gim.2024.101164
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

101164

Informations de copyright

Copyright © 2024. Published by Elsevier Inc.

Auteurs

Christine M Pak (CM)

Department of Translational and Applied Genomics, Kaiser Permanente Center for Health Research, Portland, Oregon. Electronic address: Christine.Pak@kpchr.org.

Marian J Gilmore (MJ)

Department of Translational and Applied Genomics, Kaiser Permanente Center for Health Research, Portland, Oregon.

Joanna E Bulkley (JE)

Department of Translational and Applied Genomics, Kaiser Permanente Center for Health Research, Portland, Oregon.

Pranesh Chakraborty (P)

Newborn Screening Ontario, Children's Hospital of Eastern Ontario, and Division of Metabolics University of Ottawa, Ottawa, Ontario.

Orit Dagan-Rosenfeld (O)

Department of Genetics, Stanford University School of Medicine, Stanford, California.

Ann Katherine M Foreman (AKM)

Department of Genetics, University of North Carolina, Chapel Hill, North Carolina.

Michael H Gollob (MH)

Division of Cardiology, University of Toronto, Toronto, Ontario.

Charisma L Jenkins (CL)

Department of Translational and Applied Genomics, Kaiser Permanente Center for Health Research, Portland, Oregon.

Alexander E Katz (AE)

Division of Internal Medicine, University of Michigan, Ann Arbor, Michigan.

Kristy Lee (K)

Department of Genetics, University of North Carolina, Chapel Hill, North Carolina.

Naomi Meeks (N)

Section of Genetics, Department of Pediatrics, University of Colorado, Aurora, Colorado.

Julianne M O'Daniel (JM)

Department of Genetics, University of North Carolina, Chapel Hill, North Carolina.

Jennifer E Posey (JE)

Molecular and Human Genetics Department, Baylor College of Medicine, Houston, Texas.

Shannon M Rego (SM)

Institute for Human Genetics, University of California, San Francisco, California.

Neethu Shah (N)

Molecular and Human Genetics Department, Baylor College of Medicine, Houston, Texas.

Robert D Steiner (RD)

University of Wisconsin and Marshfield Clinic, Marshfield and Madison, Wisconsin.

Andrew B Stergachis (AB)

Division of Medical Genetics, Department of Medicine, University of Washington, Seattle, Washington.

Sai Lakshmi Subramanian (SL)

Molecular and Human Genetics Department, Baylor College of Medicine, Houston, Texas, and Roche Diagnostics, Santa Clara, California.

Tracy Trotter (T)

Department of Pediatrics, John Muir Health, Walnut Creek, California.

Kathleen Wallace (K)

Department of Genetics, University of North Carolina, Chapel Hill, North Carolina.

Marc S Williams (MS)

Department of Genomic Health, Geisinger, Danville, Pennsylvania.

Katrina A B Goddard (KAB)

Department of Translational and Applied Genomics, Kaiser Permanente Center for Health Research, Portland, Oregon.

Adam H Buchanan (AH)

Department of Genomic Health, Geisinger, Danville, Pennsylvania.

Kandamurugu Manickam (K)

Department of Pediatrics, Nationwide Children's Hospital and The Ohio State University College of Medicine, Columbus, Ohio.

Bradford Powell (B)

Department of Genetics, University of North Carolina, Chapel Hill, North Carolina.

Jessica Ezzell Hunter (J)

Genomics, Ethics, and Translational Research Program, RTI International, Research Triangle Park, North Carolina.

Classifications MeSH