Molecular interactions between a diphenyl scaffold and PED/PEA15: Implications for type II diabetes therapeutics targeting PED/PEA15 - Phospholipase D1 interaction.

Cavity mapping Molecular Dynamics Nuclear Magnetic Resonance Phosphoprotein Enriched in Diabetes/Phosphoprotein Enriched in Astrocytes 15 Type II diabetes

Journal

Computational and structural biotechnology journal
ISSN: 2001-0370
Titre abrégé: Comput Struct Biotechnol J
Pays: Netherlands
ID NLM: 101585369

Informations de publication

Date de publication:
Dec 2024
Historique:
received: 04 03 2024
revised: 29 04 2024
accepted: 29 04 2024
medline: 21 5 2024
pubmed: 21 5 2024
entrez: 21 5 2024
Statut: epublish

Résumé

In a recent study, we have identified BPH03 as a promising scaffold for the development of compounds aimed at modulating the interaction between PED/PEA15 (Phosphoprotein Enriched in Diabetes/Phosphoprotein Enriched in Astrocytes 15) and PLD1 (phospholipase D1), with potential applications in type II diabetes therapy. PED/PEA15 is known to be overexpressed in certain forms of diabetes, where it binds to PLD1, thereby reducing insulin-stimulated glucose transport. The inhibition of this interaction reestablishes basal glucose transport, indicating PED as a potential target of ligands capable to recover glucose tolerance and insulin sensitivity. In this study, we employ computational methods to provide a detailed description of BPH03 interaction with PED, evidencing the presence of a hidden druggable pocket within its PLD1 binding surface. We also elucidate the conformational changes that occur during PED interaction with BPH03. Moreover, we report new NMR data supporting the in-silico findings and indicating that BPH03 disrupts the PED/PLD1 interface displacing PLD1 from its interaction with PED. Our study represents a significant advancement toward the development of potential therapeutics for the treatment of type II diabetes.

Identifiants

pubmed: 38770160
doi: 10.1016/j.csbj.2024.04.063
pii: S2001-0370(24)00146-6
pmc: PMC11103223
doi:

Types de publication

Journal Article

Langues

eng

Pagination

2001-2010

Informations de copyright

© 2024 The Authors.

Déclaration de conflit d'intérêts

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Ivan Mercurio (I)

Institute of Crystallography, CNR, Via Amendola 122/o, 70126 Bari, Italy.
Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.

Gianluca D'Abrosca (G)

Department of Clinical and Experimental Medicine, University of Foggia, Viale Pinto 1, 71122 Foggia, Italy.
Institute of Crystallography, CNR, Via Vivaldi 43, 81100, Caserta, Italy.

Maria Della Valle (M)

Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.

Gaetano Malgieri (G)

Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.

Roberto Fattorusso (R)

Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.

Carla Isernia (C)

Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.

Luigi Russo (L)

Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, University of Campania "Luigi Vanvitelli", Via Vivaldi 43, 81100 Caserta, Italy.

Sonia Di Gaetano (S)

Institute of Biostructures and Bioimaging, CNR, Via P. Castellino 111, 80131 Naples, Italy.

Emilia Maria Pedone (EM)

Institute of Biostructures and Bioimaging, CNR, Via P. Castellino 111, 80131 Naples, Italy.

Luciano Pirone (L)

Institute of Biostructures and Bioimaging, CNR, Via P. Castellino 111, 80131 Naples, Italy.

Annarita Del Gatto (A)

Institute of Biostructures and Bioimaging, CNR, Via P. Castellino 111, 80131 Naples, Italy.

Laura Zaccaro (L)

Institute of Biostructures and Bioimaging, CNR, Via P. Castellino 111, 80131 Naples, Italy.

Domenico Alberga (D)

Institute of Crystallography, CNR, Via Amendola 122/o, 70126 Bari, Italy.

Michele Saviano (M)

Institute of Crystallography, CNR, Via Vivaldi 43, 81100, Caserta, Italy.

Giuseppe Felice Mangiatordi (GF)

Institute of Crystallography, CNR, Via Amendola 122/o, 70126 Bari, Italy.

Classifications MeSH