Investigating the discrimination ability of 3D convolutional neural networks applied to altered brain MRI parametric maps.

Brain MRI Convolutional neural network Deep learning Diffusion-weighted imaging Medical image classification Simulated images

Journal

Artificial intelligence in medicine
ISSN: 1873-2860
Titre abrégé: Artif Intell Med
Pays: Netherlands
ID NLM: 8915031

Informations de publication

Date de publication:
17 May 2024
Historique:
received: 02 06 2023
revised: 05 03 2024
accepted: 15 05 2024
medline: 30 5 2024
pubmed: 30 5 2024
entrez: 29 5 2024
Statut: aheadofprint

Résumé

Convolutional neural networks (CNNs) are gradually being recognized in the neuroimaging community as a powerful tool for image analysis. Despite their outstanding performances, some aspects of CNN functioning are still not fully understood by human operators. We postulated that the interpretability of CNNs applied to neuroimaging data could be improved by investigating their behavior when they are fed data with known characteristics. We analyzed the ability of 3D CNNs to discriminate between original and altered whole-brain parametric maps derived from diffusion-weighted magnetic resonance imaging. The alteration consisted in linearly changing the voxel intensity of either one (monoregion) or two (biregion) anatomical regions in each brain volume, but without mimicking any neuropathology. Performing ten-fold cross-validation and using a hold-out set for testing, we assessed the CNNs' discrimination ability according to the intensity of the altered regions, comparing the latter's size and relative position. Monoregion CNNs showed that the larger the modified region, the smaller the intensity increase needed to achieve good performances. Biregion CNNs systematically outperformed monoregion CNNs, but could only detect one of the two target regions when tested on the corresponding monoregion images. Exploiting prior information on training data allowed for a better understanding of CNN behavior, especially when altered regions were combined. This can inform about the complexity of CNN pattern retrieval and elucidate misclassified examples, particularly relevant for pathological data. The proposed analytical approach may serve to gain insights into CNN behavior and guide the design of enhanced detection systems exploiting our prior knowledge.

Identifiants

pubmed: 38810471
pii: S0933-3657(24)00139-8
doi: 10.1016/j.artmed.2024.102897
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

102897

Informations de copyright

Copyright © 2024 The Author(s). Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare no conflict of interest.

Auteurs

Giulia Maria Mattia (GM)

ToNIC, Toulouse NeuroImaging Center, Université de Toulouse, Inserm, UPS, Toulouse, France. Electronic address: giulia-maria.mattia@inserm.fr.

Edouard Villain (E)

ToNIC, Toulouse NeuroImaging Center, Université de Toulouse, Inserm, UPS, Toulouse, France; LAAS CNRS, Université de Toulouse, CNRS, INSA, UPS, Toulouse, France. Electronic address: villain.edouard@outlook.fr.

Federico Nemmi (F)

ToNIC, Toulouse NeuroImaging Center, Université de Toulouse, Inserm, UPS, Toulouse, France. Electronic address: federico.nemmi@gmail.com.

Marie-Véronique Le Lann (MV)

LAAS CNRS, Université de Toulouse, CNRS, INSA, UPS, Toulouse, France. Electronic address: mvlelann@laas.fr.

Xavier Franceries (X)

CRCT, Centre de Recherche en Cancérologie de Toulouse, Inserm, UPS, Toulouse, France. Electronic address: xavier.franceries@inserm.fr.

Patrice Péran (P)

ToNIC, Toulouse NeuroImaging Center, Université de Toulouse, Inserm, UPS, Toulouse, France. Electronic address: patrice.peran@inserm.fr.

Classifications MeSH