An In-Vitro Evaluation of the Antimicrobial Efficacy of a Novel Irrigant Using Next-Generation Sequencing.

biofilms microbiome next-generation sequencing sodium hypochlorite

Journal

Journal of endodontics
ISSN: 1878-3554
Titre abrégé: J Endod
Pays: United States
ID NLM: 7511484

Informations de publication

Date de publication:
28 May 2024
Historique:
received: 28 09 2023
revised: 19 05 2024
accepted: 20 05 2024
medline: 31 5 2024
pubmed: 31 5 2024
entrez: 30 5 2024
Statut: aheadofprint

Résumé

To evaluate the antimicrobial activity of Triton irrigation versus 4% NaOCl utilizing a direct contact test and an extracted tooth model. In the first experiment, a direct contact test was conducted to compare bacterial DNA removal and microbial diversity changes following irrigation with sodium hypochlorite (4% NaOCl) or Triton. Hydroxyapatite and dentin discs were inoculated with subgingival human-derived dental plaque for 2 weeks utilizing a CDC biofilm reactor and subsequently challenged with the root canal irrigants for 5 min. In the second experiment, teeth contaminated with a multispecies biofilm (n=24) were assigned into two treatment groups, NaOCl or Triton irrigation. Samples were obtained for qPCR and next-generation sequencing (NGS) analysis before and after instrumentation. The Shannon and Chao1 indices were used to measure alpha diversity. The Bray-Curtis dissimilarity and ANOSIM was used to measure beta diversity. Differences in abundances of genera were evaluated using Kruskal-Wallis test with Bonferroni corrections. The direct contact test revealed no significant differences in the bacterial load based on 16S rRNA gene molecules/μL, reads, or differences in the Shannon index among groups. In the extracted tooth model, a bacterial load reduction of log Both irrigants had limited antimicrobial activity in the direct contact test. When used in conjunction with mechanical instrumentation both irrigants were able to reduce the bacterial DNA load and diversity in comparison with pretreatment communities. The NaOCl irrigation, followed by EDTA flush, was more effective in decreasing DNA counts from low-abundance organisms.

Identifiants

pubmed: 38815857
pii: S0099-2399(24)00305-4
doi: 10.1016/j.joen.2024.05.010
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright © 2024. Published by Elsevier Inc.

Auteurs

Mallory Hackbarth (M)

Division of Endodontics, University of Minnesota School of Dentistry, Minneapolis, MN, USA.

Meghan Montoya (M)

Division of Endodontics, University of Minnesota School of Dentistry, Minneapolis, MN, USA.

Craig W Noblett (CW)

Division of Endodontics, University of Minnesota School of Dentistry, Minneapolis, MN, USA.

Bruno Lima (B)

Division of Basic & Translational Research, Department of Surgery, University of Minnesota, Minneapolis, MN, USA.

Matthew Dietz (M)

Division of Basic Sciences, Department of Diagnostic and Biological Sciences, School of Dentistry, University of Minnesota, Minneapolis, MN, 55455, USA.

Christopher Staley (C)

Division of Basic Sciences, Department of Diagnostic and Biological Sciences, School of Dentistry, University of Minnesota, Minneapolis, MN, 55455, USA.

Ronald Ordinola Zapata (RO)

Division of Endodontics, University of Minnesota School of Dentistry, Minneapolis, MN, USA. Electronic address: rordinol@umn.edu.

Classifications MeSH