Sugarcane bagasse derived xylooligosaccharides produced by an arabinofuranosidase/xylobiohydrolase from Bifidobacterium longum in synergism with xylanases.


Journal

Carbohydrate polymers
ISSN: 1879-1344
Titre abrégé: Carbohydr Polym
Pays: England
ID NLM: 8307156

Informations de publication

Date de publication:
01 Sep 2024
Historique:
received: 26 12 2023
revised: 03 05 2024
accepted: 07 05 2024
medline: 2 6 2024
pubmed: 2 6 2024
entrez: 1 6 2024
Statut: ppublish

Résumé

Arabinoxylan is a major hemicellulose in the sugarcane plant cell wall with arabinose decorations that impose steric restrictions on the activity of xylanases against this substrate. Enzymatic removal of the decorations by arabinofuranosidases can allow a more efficient arabinoxylan degradation by xylanases. Here we produced and characterized a recombinant Bifidobacterium longum arabinofuranosidase from glycoside hydrolase family 43 (BlAbf43) and applied it, together with GH10 and GH11 xylanases, to produce xylooligosaccharides (XOS) from wheat arabinoxylan and alkali pretreated sugarcane bagasse. The enzyme synergistically enhanced XOS production by GH10 and GH11 xylanases, being particularly efficient in combination with the latter family of enzymes, with a degree of synergism of 1.7. We also demonstrated that the enzyme is capable of not only removing arabinose decorations from the arabinoxylan and from the non-reducing end of the oligomeric substrates, but also hydrolyzing the xylan backbone yielding mostly xylobiose and xylose in particular cases. Structural studies of BlAbf43 shed light on the molecular basis of the substrate recognition and allowed hypothesizing on the structural reasons of its multifunctionality.

Identifiants

pubmed: 38823916
pii: S0144-8617(24)00474-0
doi: 10.1016/j.carbpol.2024.122248
pii:
doi:

Substances chimiques

Oligosaccharides 0
Glycoside Hydrolases EC 3.2.1.-
Glucuronates 0
xylooligosaccharide 0
bagasse 9006-97-7
Endo-1,4-beta Xylanases EC 3.2.1.8
Xylans 0
alpha-N-arabinofuranosidase EC 3.2.1.55
Cellulose 9004-34-6
arabinoxylan 9040-27-1
xylobiose ID02R0EG7P
Recombinant Proteins 0
Disaccharides 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

122248

Informations de copyright

Copyright © 2024 Elsevier Ltd. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known conflict of interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Caio Cesar de Mello Capetti (CCM)

Instituto de Física de São Carlos, Universidade de São Paulo, Avenida Trabalhador São-carlense 400, 13566-590 São Carlos, SP, Brazil.

Ornella Ontañon (O)

Instituto de Agrobiotecnología y Biología Molecular (IABIMO), CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA), Los Reseros y N. Repetto, Hurlingham B1686, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Ciudad Autónoma de Buenos Aires, Argentina.

Laura E Navas (LE)

Instituto de Agrobiotecnología y Biología Molecular (IABIMO), CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA), Los Reseros y N. Repetto, Hurlingham B1686, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Ciudad Autónoma de Buenos Aires, Argentina.

Eleonora Campos (E)

Instituto de Agrobiotecnología y Biología Molecular (IABIMO), CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA), Los Reseros y N. Repetto, Hurlingham B1686, Buenos Aires, Argentina; Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Ciudad Autónoma de Buenos Aires, Argentina.

Rachael Simister (R)

Centre for Novel Agricultural Products, Department of Biology, CNAP, University of York, York YO10 5DD, United Kingdom.

Adam Dowle (A)

Technology Facility, Proteomics Laboratory, Department of Biology, University of York, York YO10 5DD, United Kingdom.

Marcelo Vizoná Liberato (MV)

Instituto de Física de São Carlos, Universidade de São Paulo, Avenida Trabalhador São-carlense 400, 13566-590 São Carlos, SP, Brazil.

Vanessa de Oliveira Arnoldi Pellegrini (VOA)

Instituto de Física de São Carlos, Universidade de São Paulo, Avenida Trabalhador São-carlense 400, 13566-590 São Carlos, SP, Brazil.

Leonardo D Gómez (LD)

Centre for Novel Agricultural Products, Department of Biology, CNAP, University of York, York YO10 5DD, United Kingdom. Electronic address: leonardo.gomez@york.ac.uk.

Igor Polikarpov (I)

Instituto de Física de São Carlos, Universidade de São Paulo, Avenida Trabalhador São-carlense 400, 13566-590 São Carlos, SP, Brazil. Electronic address: ipolikarpov@ifsc.usp.br.

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Classifications MeSH