Compartmentalization proteomics revealed endolysosomal protein network changes in a goat model of atrial fibrillation.

Cell biology Molecular biology Proteomics Transcriptomics

Journal

iScience
ISSN: 2589-0042
Titre abrégé: iScience
Pays: United States
ID NLM: 101724038

Informations de publication

Date de publication:
21 Jun 2024
Historique:
received: 30 08 2023
revised: 07 02 2024
accepted: 25 03 2024
medline: 3 6 2024
pubmed: 3 6 2024
entrez: 3 6 2024
Statut: epublish

Résumé

Endolysosomes (EL) are known for their role in regulating both intracellular trafficking and proteostasis. EL facilitate the elimination of damaged membranes, protein aggregates, membranous organelles and play an important role in calcium signaling. The specific role of EL in cardiac atrial fibrillation (AF) is not well understood. We isolated atrial EL organelles from AF goat biopsies and conducted a comprehensive integrated omics analysis to study the EL-specific proteins and pathways. We also performed electron tomography, protein and enzyme assays on these biopsies. Our results revealed the upregulation of the AMPK pathway and the expression of EL-specific proteins that were not found in whole tissue lysates, including GAA, DYNLRB1, CLTB, SIRT3, CCT2, and muscle-specific HSPB2. We also observed structural anomalies, such as autophagic-vacuole formation, irregularly shaped mitochondria, and glycogen deposition. Our results provide molecular information suggesting EL play a role in AF disease process over extended time frames.

Identifiants

pubmed: 38827406
doi: 10.1016/j.isci.2024.109609
pii: S2589-0042(24)00831-9
pmc: PMC11141153
doi:

Types de publication

Journal Article

Langues

eng

Pagination

109609

Informations de copyright

© 2024 The Author(s).

Déclaration de conflit d'intérêts

The authors declare no competing interests.

Auteurs

Thamali Ayagama (T)

Department of Pharmacology, University of Oxford, Oxford, UK.

Philip D Charles (PD)

Target Discovery Institute, University of Oxford, Oxford, UK.

Samuel J Bose (SJ)

Department of Pharmacology, University of Oxford, Oxford, UK.

Barry Boland (B)

Department of Pharmacology and Therapeutics, University College Cork, Cork, Ireland.

David A Priestman (DA)

Department of Pharmacology, University of Oxford, Oxford, UK.

Daniel Aston (D)

Department of Anaesthesia and Critical Care, Royal Papworth Hospital NHS Foundation Trust, Papworth Road, Cambridge CB2 0AY, UK.

Georgina Berridge (G)

Target Discovery Institute, University of Oxford, Oxford, UK.

Roman Fischer (R)

Target Discovery Institute, University of Oxford, Oxford, UK.

Adam P Cribbs (AP)

Nuffield Department of Orthopaedics Rheumatology and Musculoskeletal Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, Botnar Research Centre, University of Oxford, Headington OX3 7LD, UK.

Qianqian Song (Q)

Department of Pharmacology, University of Oxford, Oxford, UK.

Gary R Mirams (GR)

Centre for Mathematical Medicine & Biology, Mathematical Sciences, University of Nottingham, Nottingham NG7 2RD, UK.

Kwabena Amponsah (K)

Centre for Mathematical Medicine & Biology, Mathematical Sciences, University of Nottingham, Nottingham NG7 2RD, UK.

Lisa Heather (L)

Department of Physiology, Anatomy and Genetics, , University of Oxford, South Park Road, Oxford OX1 3PT, UK.

Antony Galione (A)

Department of Pharmacology, University of Oxford, Oxford, UK.

Neil Herring (N)

Department of Physiology, Anatomy and Genetics, , University of Oxford, South Park Road, Oxford OX1 3PT, UK.

Holger Kramer (H)

Mass spectrometry Facility, The MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge CB2 0QH, UK.

Rebecca A Capel (RA)

Department of Pharmacology, University of Oxford, Oxford, UK.

Frances M Platt (FM)

Department of Pharmacology, University of Oxford, Oxford, UK.

Ulrich Schotten (U)

Departments of Physiology and Cardiology, Cardiovascular Research Institute Maastricht, Maastricht University, Maastricht, the Netherlands.

Sander Verheule (S)

Departments of Physiology and Cardiology, Cardiovascular Research Institute Maastricht, Maastricht University, Maastricht, the Netherlands.

Rebecca A B Burton (RAB)

Department of Pharmacology, University of Oxford, Oxford, UK.
University of Liverpool, Department of Pharmacology and Therapeutics, Institute of Systems, Molecular and Integrative Biology, Liverpool, UK.

Classifications MeSH