Expansion and Functional Diversification of Long-Wavelength-Sensitive Opsin in Anabantoid Fishes.
Gene duplication
Gene expression
Opsin gene
Siamese fighting fish
Journal
Journal of molecular evolution
ISSN: 1432-1432
Titre abrégé: J Mol Evol
Pays: Germany
ID NLM: 0360051
Informations de publication
Date de publication:
11 Jun 2024
11 Jun 2024
Historique:
received:
18
07
2023
accepted:
25
05
2024
medline:
11
6
2024
pubmed:
11
6
2024
entrez:
11
6
2024
Statut:
aheadofprint
Résumé
Gene duplication is one of the most important sources of novel genotypic diversity and the subsequent evolution of phenotypic diversity. Determining the evolutionary history and functional changes of duplicated genes is crucial for a comprehensive understanding of adaptive evolution. The evolutionary history of visual opsin genes is very dynamic, with repeated duplication events followed by sub- or neofunctionalization. While duplication of the green-sensitive opsins rh2 is common in teleost fish, fewer cases of multiple duplication events of the red-sensitive opsin lws are known. In this study, we investigate the visual opsin gene repertoire of the anabantoid fishes, focusing on the five lws opsin genes found in the genus Betta. We determine the evolutionary history of the lws opsin gene by taking advantage of whole-genome sequences of nine anabantoid species, including the newly assembled genome of Betta imbellis. Our results show that at least two independent duplications of lws occurred in the Betta lineage. The analysis of amino acid sequences of the lws paralogs of Betta revealed high levels of diversification in four of the seven transmembrane regions of the lws protein. Amino acid substitutions at two key-tuning sites are predicted to lead to differentiation of absorption maxima (λ
Identifiants
pubmed: 38861038
doi: 10.1007/s00239-024-10181-0
pii: 10.1007/s00239-024-10181-0
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Hector Fellow Academy
ID : 3000517
Organisme : Deutsche Forschungsgemeinschaft
ID : 447189140
Organisme : Deutsche Forschungsgemeinschaft
ID : 428846198
Organisme : Deutsche Forschungsgemeinschaft
ID : INST 269/768-1
Informations de copyright
© 2024. The Author(s).
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