CBD2: A functional biomarker database for colorectal cancer.
biomarker
colorectal cancer
database
network analysis
Journal
iMeta
ISSN: 2770-596X
Titre abrégé: Imeta
Pays: Australia
ID NLM: 9918350383706676
Informations de publication
Date de publication:
Feb 2024
Feb 2024
Historique:
received:
10
10
2023
accepted:
07
11
2023
medline:
13
6
2024
pubmed:
13
6
2024
entrez:
13
6
2024
Statut:
epublish
Résumé
The rapidly evolving landscape of biomarkers for colorectal cancer (CRC) necessitates an integrative, updated repository. In response, we constructed the Colorectal Cancer Biomarker Database (CBD), which collected and displayed the curated biomedicine information for 870 CRC biomarkers in the previous study. Building on CBD, we have now developed CBD2, which includes information on 1569 newly reported biomarkers derived from different biological sources (DNA, RNA, protein, and others) and clinical applications (diagnosis, treatment, and prognosis). CBD2 also incorporates information on nonbiomarkers that have been identified as unsuitable for use as biomarkers in CRC. A key new feature of CBD2 is its network analysis function, by which users can investigate the visible and topological network between biomarkers and identify their relevant pathways. CBD2 also allows users to query a series of chemicals, drug combinations, or multiple targets, to enable multidrug, multitarget, multipathway analyses, toward facilitating the design of polypharmacological treatments for CRC. CBD2 is freely available at http://www.eyeseeworld.com/cbd.
Identifiants
pubmed: 38868513
doi: 10.1002/imt2.155
pii: IMT2155
pmc: PMC10989088
doi:
Types de publication
Journal Article
Langues
eng
Pagination
e155Informations de copyright
© 2023 The Authors. iMeta published by John Wiley & Sons Australia, Ltd on behalf of iMeta Science.
Déclaration de conflit d'intérêts
The authors declare no conflict of interest.