Comprehensive profiles of sulfur cycling microbial communities along a mangrove sediment depth.

Community assembly Functional genes Mangrove sediment Sulfur cycling Vertical distribution

Journal

The Science of the total environment
ISSN: 1879-1026
Titre abrégé: Sci Total Environ
Pays: Netherlands
ID NLM: 0330500

Informations de publication

Date de publication:
12 Jun 2024
Historique:
received: 24 03 2024
revised: 30 05 2024
accepted: 11 06 2024
medline: 15 6 2024
pubmed: 15 6 2024
entrez: 14 6 2024
Statut: aheadofprint

Résumé

The sulfur (S) cycle is an important biogeochemical cycle with profound implications for both cellular- and ecosystem-level processes by diverse microorganisms. Mangrove sediments are a hotspot of biogeochemical cycling, especially for the S cycle with high concentrations of S compounds. Previous studies have mainly focused on some specific inorganic S cycling processes without paying specific attention to the overall S-cycling communities and processes as well as organic S metabolism. In this study, we comprehensively analyzed the distribution, ecological network and assembly mechanisms of S cycling microbial communities and their changes with sediment depths using metagenome sequencing data. The results showed that the abundance of gene families involved in sulfur oxidation, assimilatory sulfate reduction, and dimethylsulfoniopropionate (DMSP) cleavage and demethylation decreased with sediment depths, while those involved in S reduction and dimethyl sulfide (DMS) transformation showed an opposite trend. Specifically, glpE, responsible for converting S

Identifiants

DOI: 10.1016/j.scitotenv.2024.173961 PMID: 38876338
pubmed: 38876338
pii: S0048-9697(24)04109-3
doi: 10.1016/j.scitotenv.2024.173961
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

173961

Informations de copyright

Copyright © 2024. Published by Elsevier B.V.

Auteurs

Lu Qian (L)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Bozhi Yan (B)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Jiayin Zhou (J)

Institute of Marine Science and Technology, Shandong University, Qingdao 266237, China.

Yijun Fan (Y)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Mei Tao (M)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China; College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China.

Wengen Zhu (W)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Cheng Wang (C)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Qichao Tu (Q)

Institute of Marine Science and Technology, Shandong University, Qingdao 266237, China.

Yun Tian (Y)

Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen 361005, China.

Qiang He (Q)

Department of Civil and Environmental Engineering, The University of Tennessee, Knoxville, TN 37996, USA.

Kun Wu (K)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Mingyang Niu (M)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Qingyun Yan (Q)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China.

Zoran Nikoloski (Z)

Bioinformatics, Institute of Biochemistry and Biology, University of Potsdam, Potsdam 14476, Germany; Systems Biology and Mathematical Modeling, Max Planck Institute of Molecular Plant Physiology, Potsdam 14476, Germany.

Guangli Liu (G)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China. Electronic address: liugl@mail.sysu.edu.cn.

Xiaoli Yu (X)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China. Electronic address: yuxiaoli@sml-zhuhai.cn.

Zhili He (Z)

School of Environmental Science and Engineering, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), State Key Laboratory of Biocontrol, Sun Yat-Sen University, Guangzhou 510006, China. Electronic address: hezhili@sml-zhuhai.cn.

Classifications MeSH