Optimizing Rare Disease Gait Classification through Data Balancing and Generative AI: Insights from Hereditary Cerebellar Ataxia.

cerebellar ataxia conditional tabular generative artificial network data augmentation data balancing gait analysis generative artificial intelligence generative artificial network inertial measurement unit rare diseases synthetic minority oversampling technique

Journal

Sensors (Basel, Switzerland)
ISSN: 1424-8220
Titre abrégé: Sensors (Basel)
Pays: Switzerland
ID NLM: 101204366

Informations de publication

Date de publication:
03 Jun 2024
Historique:
received: 09 05 2024
revised: 28 05 2024
accepted: 31 05 2024
medline: 19 6 2024
pubmed: 19 6 2024
entrez: 19 6 2024
Statut: epublish

Résumé

The interpretability of gait analysis studies in people with rare diseases, such as those with primary hereditary cerebellar ataxia (pwCA), is frequently limited by the small sample sizes and unbalanced datasets. The purpose of this study was to assess the effectiveness of data balancing and generative artificial intelligence (AI) algorithms in generating synthetic data reflecting the actual gait abnormalities of pwCA. Gait data of 30 pwCA (age: 51.6 ± 12.2 years; 13 females, 17 males) and 100 healthy subjects (age: 57.1 ± 10.4; 60 females, 40 males) were collected at the lumbar level with an inertial measurement unit. Subsampling, oversampling, synthetic minority oversampling, generative adversarial networks, and conditional tabular generative adversarial networks (ctGAN) were applied to generate datasets to be input to a random forest classifier. Consistency and explainability metrics were also calculated to assess the coherence of the generated dataset with known gait abnormalities of pwCA. ctGAN significantly improved the classification performance compared with the original dataset and traditional data augmentation methods. ctGAN are effective methods for balancing tabular datasets from populations with rare diseases, owing to their ability to improve diagnostic models with consistent explainability.

Identifiants

pubmed: 38894404
pii: s24113613
doi: 10.3390/s24113613
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : BRIC "Bando Ricerche in Collaborazione 2022"
ID : 7074/470 DIG

Auteurs

Dante Trabassi (D)

Department of Medical and Surgical Sciences and Biotechnologies, "Sapienza" University of Rome, 04100 Latina, Italy.

Stefano Filippo Castiglia (SF)

Department of Medical and Surgical Sciences and Biotechnologies, "Sapienza" University of Rome, 04100 Latina, Italy.
Department of Brain and Behavioral Sciences, University of Pavia, 27100 Pavia, Italy.

Fabiano Bini (F)

Department of Mechanical and Aerospace Engineering, Sapienza University of Rome, 00184 Rome, Italy.

Franco Marinozzi (F)

Department of Mechanical and Aerospace Engineering, Sapienza University of Rome, 00184 Rome, Italy.

Arash Ajoudani (A)

Department of Advanced Robotics, Italian Institute of Technology, 16163 Genoa, Italy.

Marta Lorenzini (M)

Department of Advanced Robotics, Italian Institute of Technology, 16163 Genoa, Italy.

Giorgia Chini (G)

Department of Occupational and Environmental Medicine, Epidemiology and Hygiene, INAIL, Monte Porzio Catone, 00078 Rome, Italy.

Tiwana Varrecchia (T)

Department of Occupational and Environmental Medicine, Epidemiology and Hygiene, INAIL, Monte Porzio Catone, 00078 Rome, Italy.

Alberto Ranavolo (A)

Department of Occupational and Environmental Medicine, Epidemiology and Hygiene, INAIL, Monte Porzio Catone, 00078 Rome, Italy.

Roberto De Icco (R)

Department of Brain and Behavioral Sciences, University of Pavia, 27100 Pavia, Italy.
Headache Science & Neurorehabilitation Unit, IRCCS Mondino Foundation, 27100 Pavia, Italy.

Carlo Casali (C)

Department of Medical and Surgical Sciences and Biotechnologies, "Sapienza" University of Rome, 04100 Latina, Italy.

Mariano Serrao (M)

Department of Medical and Surgical Sciences and Biotechnologies, "Sapienza" University of Rome, 04100 Latina, Italy.
Movement Analysis Laboratory, Policlinico Italia, 00162 Rome, Italy.

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