A literature review: machine learning-based stem cell investigation.

Machine learning (ML) cell classification computational cell biology diagnosis stem cell (SC)

Journal

Annals of translational medicine
ISSN: 2305-5839
Titre abrégé: Ann Transl Med
Pays: China
ID NLM: 101617978

Informations de publication

Date de publication:
10 Jun 2024
Historique:
received: 27 11 2023
accepted: 08 01 2024
medline: 24 6 2024
pubmed: 24 6 2024
entrez: 24 6 2024
Statut: ppublish

Résumé

Stem cell (SC) is a crucial factor of the human organ that is significantly important for clinical solutions. However, consideration of SC in the therapeutic or disease classification process is complex in terms of accurate classification and prediction. To overcome this issue, Machine learning (ML) is the most effective technique that is frequently used in cell-based clinical applications for diagnosis, treatment, and disease identification. Recently it has been implemented for SC observation which is a crucial factor for clinical solutions. Thus, the objective of this review work is to represent the effectiveness of ML techniques for SC observation from clinical perspectives with current challenges and future direction for further improvement. In this study, we conducted a short review of ML-based applications in SCs investigation and classification for the improvement of clinical solutions. We explored studies from five scientific databases (Web of Science, Google Scholar, Scopus, ScienceDirect, and PubMed) with several keywords related to the objective of our research study. After primary and secondary screening, 15 articles were utilized for this research study and summarized the observation results in terms of ten aspects (year of publication, focused area, objective, experimented datasets, selected ML classifiers, experimental procedure, classification parameter, overall performance in terms of accuracy, advancements, and limitations) with their current limitations and future improvement directions. The majority of the existing literature review works are limited to focusing on specific SC-based investigation, limited evaluation attributes, and lack of challenges and future improvement suggestions. Also, most of the review work didn't consider the investigation of the effectiveness of the ML technique in SC biology. Therefore, in this paper, we investigate existing literature related to the development of clinical solutions considering ML techniques, in the area of SC and cell culture processes and highlight current challenges and future directions. The majority of studies focused on the disease identification process and implemented the convolutional neural network and support vector machine techniques. The prime limitations of the investigated studies are related to the focused area, investigated SCs, the small number of experimental datasets, and validation techniques. None of the studies provided complete evidence to determine an optimal ML technique for SC to build classification or predictive models. Therefore, further concern is required to develop and improve the developed solutions including other ML techniques, large datasets, and advanced evaluation processes.

Sections du résumé

Background and Objective UNASSIGNED
Stem cell (SC) is a crucial factor of the human organ that is significantly important for clinical solutions. However, consideration of SC in the therapeutic or disease classification process is complex in terms of accurate classification and prediction. To overcome this issue, Machine learning (ML) is the most effective technique that is frequently used in cell-based clinical applications for diagnosis, treatment, and disease identification. Recently it has been implemented for SC observation which is a crucial factor for clinical solutions. Thus, the objective of this review work is to represent the effectiveness of ML techniques for SC observation from clinical perspectives with current challenges and future direction for further improvement.
Methods UNASSIGNED
In this study, we conducted a short review of ML-based applications in SCs investigation and classification for the improvement of clinical solutions. We explored studies from five scientific databases (Web of Science, Google Scholar, Scopus, ScienceDirect, and PubMed) with several keywords related to the objective of our research study. After primary and secondary screening, 15 articles were utilized for this research study and summarized the observation results in terms of ten aspects (year of publication, focused area, objective, experimented datasets, selected ML classifiers, experimental procedure, classification parameter, overall performance in terms of accuracy, advancements, and limitations) with their current limitations and future improvement directions.
Key Content and Findings UNASSIGNED
The majority of the existing literature review works are limited to focusing on specific SC-based investigation, limited evaluation attributes, and lack of challenges and future improvement suggestions. Also, most of the review work didn't consider the investigation of the effectiveness of the ML technique in SC biology. Therefore, in this paper, we investigate existing literature related to the development of clinical solutions considering ML techniques, in the area of SC and cell culture processes and highlight current challenges and future directions.
Conclusions UNASSIGNED
The majority of studies focused on the disease identification process and implemented the convolutional neural network and support vector machine techniques. The prime limitations of the investigated studies are related to the focused area, investigated SCs, the small number of experimental datasets, and validation techniques. None of the studies provided complete evidence to determine an optimal ML technique for SC to build classification or predictive models. Therefore, further concern is required to develop and improve the developed solutions including other ML techniques, large datasets, and advanced evaluation processes.

Identifiants

pubmed: 38911568
doi: 10.21037/atm-23-1937
pii: atm-12-03-52
pmc: PMC11193562
doi:

Types de publication

Journal Article Review

Langues

eng

Pagination

52

Informations de copyright

2024 Annals of Translational Medicine. All rights reserved.

Déclaration de conflit d'intérêts

Conflicts of Interest: Both authors have completed the ICMJE uniform disclosure form (available at https://atm.amegroups.com/article/view/10.21037/atm-23-1937/coif). The authors have no conflicts of interest to declare.

Auteurs

Jinat Ara (J)

Department of Electrical Engineering and Information Systems, University of Pannonia, Veszprem, Hungary.

Tanzila Khatun (T)

Department of Biochemistry and Biotechnology, Independent University of Bangladesh (IUB), Dhaka, Bangladesh.

Classifications MeSH