eDNA-based survey of the marine vertebrate biodiversity off the west coast of Guadeloupe (French West Indies).
12S mitochondrial ribosomal RNA
West Indies
environmental-DNA
fish
marine mammals
metabarcoding
temporal variations
Journal
Biodiversity data journal
ISSN: 1314-2828
Titre abrégé: Biodivers Data J
Pays: Bulgaria
ID NLM: 101619899
Informations de publication
Date de publication:
2024
2024
Historique:
received:
13
04
2024
accepted:
19
06
2024
medline:
1
7
2024
pubmed:
1
7
2024
entrez:
1
7
2024
Statut:
epublish
Résumé
In the marine environment, knowledge of biodiversity remains incomplete for many taxa, requiring assessments to understand and monitor biodiversity loss. Environmental DNA (eDNA) metabarcoding is a powerful tool for monitoring marine biodiversity, as it enables several taxa to be characterised simultaneously in a single sample. However, the data generated by environmental DNA metabarcoding are often not easily reusable. Implementing FAIR principles and standards for eDNA-derived data can facilitate data-sharing within the scientific community. This study focuses on the detection of marine vertebrate biodiversity using eDNA metabarcoding on the leeward coast of Guadeloupe, a known hotspot for marine biodiversity in the French West Indies. Occurrences and DNA-derived data are shared here using DarwinCore standards combined with MIMARKS standards.
Sections du résumé
Background
UNASSIGNED
In the marine environment, knowledge of biodiversity remains incomplete for many taxa, requiring assessments to understand and monitor biodiversity loss. Environmental DNA (eDNA) metabarcoding is a powerful tool for monitoring marine biodiversity, as it enables several taxa to be characterised simultaneously in a single sample. However, the data generated by environmental DNA metabarcoding are often not easily reusable. Implementing FAIR principles and standards for eDNA-derived data can facilitate data-sharing within the scientific community.
New information
UNASSIGNED
This study focuses on the detection of marine vertebrate biodiversity using eDNA metabarcoding on the leeward coast of Guadeloupe, a known hotspot for marine biodiversity in the French West Indies. Occurrences and DNA-derived data are shared here using DarwinCore standards combined with MIMARKS standards.
Identifiants
pubmed: 38948133
doi: 10.3897/BDJ.12.e125348
pii: 125348
pmc: PMC11214010
doi:
Types de publication
Journal Article
Langues
eng
Pagination
e125348Informations de copyright
Rachel Haderlé, Laurent Bouveret, Jordane Chazal, Justine Girardet, Samuel Iglésias, Pascal-Jean Lopez, Cédric Millon, Alice Valentini, Visotheary Ung, Jean-Luc Jung.