Sharing massive biomedical data at magnitudes lower bandwidth using implicit neural function.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
09 Jul 2024
Historique:
medline: 3 7 2024
pubmed: 3 7 2024
entrez: 3 7 2024
Statut: ppublish

Résumé

Efficient storage and sharing of massive biomedical data would open up their wide accessibility to different institutions and disciplines. However, compressors tailored for natural photos/videos are rapidly limited for biomedical data, while emerging deep learning-based methods demand huge training data and are difficult to generalize. Here, we propose to conduct Biomedical data compRession with Implicit nEural Function (BRIEF) by representing the target data with compact neural networks, which are data specific and thus have no generalization issues. Benefiting from the strong representation capability of implicit neural function, BRIEF achieves 2[Formula: see text]3 orders of magnitude compression on diverse biomedical data at significantly higher fidelity than existing techniques. Besides, BRIEF is of consistent performance across the whole data volume, and supports customized spatially varying fidelity. BRIEF's multifold advantageous features also serve reliable downstream tasks at low bandwidth. Our approach will facilitate low-bandwidth data sharing and promote collaboration and progress in the biomedical field.

Identifiants

pubmed: 38959033
doi: 10.1073/pnas.2320870121
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2320870121

Subventions

Organisme : Ministry of Science and Technology of the People's Republic of China (MOST)
ID : 2020AAA0108202
Organisme : | Beijing Municipal Natural Science Foundation ()
ID : Z200021

Déclaration de conflit d'intérêts

Competing interests statement:The authors declare no competing interest.

Auteurs

Runzhao Yang (R)

Department of Automation, Tsinghua University, Beijing 100084, China.
Institute of Brain and Cognitive Sciences, Tsinghua University, Beijing 100084, China.
Shanghai Artificial Intelligence Laboratory, Shanghai 200232, China.

Tingxiong Xiao (T)

Department of Automation, Tsinghua University, Beijing 100084, China.

Yuxiao Cheng (Y)

Department of Automation, Tsinghua University, Beijing 100084, China.

Anan Li (A)

Britton Chance Center and MoE Key Laboratory for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, Wuhan 430074, China.
Huazhong University of Science and Technology-Suzhou Institute for Brainsmatics, Jiangsu Industrial Technology Research Institute, Suzhou 215123, China.

Jinyuan Qu (J)

Department of Automation, Tsinghua University, Beijing 100084, China.

Rui Liang (R)

School of Biomedical Engineering, Hainan University, Haikou 570228, China.

Shengda Bao (S)

Britton Chance Center and MoE Key Laboratory for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, Wuhan 430074, China.

Xiaofeng Wang (X)

Britton Chance Center and MoE Key Laboratory for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, Wuhan 430074, China.

Jue Wang (J)

Department of Automation, Tsinghua University, Beijing 100084, China.

Jinli Suo (J)

Department of Automation, Tsinghua University, Beijing 100084, China.
Institute of Brain and Cognitive Sciences, Tsinghua University, Beijing 100084, China.
Shanghai Artificial Intelligence Laboratory, Shanghai 200232, China.

Qingming Luo (Q)

School of Biomedical Engineering, Hainan University, Haikou 570228, China.

Qionghai Dai (Q)

Department of Automation, Tsinghua University, Beijing 100084, China.
Institute of Brain and Cognitive Sciences, Tsinghua University, Beijing 100084, China.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH