Many locks to one key: N-acetylneuraminic acid binding to proteins.

Gram-negative bacteria N-acetyl neuraminic acid Neu5Ac binding sites drug discovery molecular recognition protein structures sialic acids

Journal

IUCrJ
ISSN: 2052-2525
Titre abrégé: IUCrJ
Pays: England
ID NLM: 101623101

Informations de publication

Date de publication:
01 Sep 2024
Historique:
medline: 5 7 2024
pubmed: 5 7 2024
entrez: 5 7 2024
Statut: aheadofprint

Résumé

Sialic acids play crucial roles in cell surface glycans of both eukaryotic and prokaryotic organisms, mediating various biological processes, including cell-cell interactions, development, immune response, oncogenesis and host-pathogen interactions. This review focuses on the β-anomeric form of N-acetylneuraminic acid (Neu5Ac), particularly its binding affinity towards various proteins, as elucidated by solved protein structures. Specifically, we delve into the binding mechanisms of Neu5Ac to proteins involved in sequestering and transporting Neu5Ac in Gram-negative bacteria, with implications for drug design targeting these proteins as antimicrobial agents. Unlike the initial assumptions, structural analyses revealed significant variability in the Neu5Ac binding pockets among proteins, indicating diverse evolutionary origins and binding modes. By comparing these findings with existing structures from other systems, we can effectively highlight the intricate relationship between protein structure and Neu5Ac recognition, emphasizing the need for tailored drug design strategies to inhibit Neu5Ac-binding proteins across bacterial species.

Identifiants

pubmed: 38965900
pii: S2052252524005360
doi: 10.1107/S2052252524005360
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Department of Biotechnology, Ministry of Science and Technology, India
ID : BT/PR5081/INF/156/2012
Organisme : Department of Biotechnology, Ministry of Science and Technology, India
ID : BT/IN/SWEDEN/06/SR/2017-18
Organisme : Department of Biotechnology, Ministry of Science and Technology, India
ID : BT/PR12422/MED/31/287/214

Informations de copyright

open access.

Auteurs

KanagaVijayan Dhanabalan (K)

Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.

YiYang Cheng (Y)

Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.

Trung Thach (T)

Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.

Ramaswamy Subramanian (R)

Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.

Classifications MeSH