Fixed-target pump-probe SFX: eliminating the scourge of light contamination.

X-ray free-electron lasers fixed targets light contamination photoreceptor light–oxygen–voltage domains pump–probe room-temperature crystallography sample consumption serial femtosecond crystallography time-resolved crystallography

Journal

IUCrJ
ISSN: 2052-2525
Titre abrégé: IUCrJ
Pays: England
ID NLM: 101623101

Informations de publication

Date de publication:
01 Sep 2024
Historique:
medline: 9 7 2024
pubmed: 9 7 2024
entrez: 9 7 2024
Statut: aheadofprint

Résumé

X-ray free-electron laser (XFEL) light sources have enabled the rapid growth of time-resolved structural experiments, which provide crucial information on the function of macromolecules and their mechanisms. Here, the aim was to commission the SwissMX fixed-target sample-delivery system at the SwissFEL Cristallina experimental station using the PSI-developed micro-structured polymer (MISP) chip for pump-probe time-resolved experiments. To characterize the system, crystals of the light-sensitive protein light-oxygen-voltage domain 1 (LOV1) from Chlamydomonas reinhardtii were used. Using different experimental settings, the accidental illumination, referred to as light contamination, of crystals mounted in wells adjacent to those illuminated by the pump laser was examined. It was crucial to control the light scattering from and through the solid supports otherwise significant contamination occurred. However, the results here show that the opaque MISP chips are suitable for defined pump-probe studies of a light-sensitive protein. The experiment also probed the sub-millisecond structural dynamics of LOV1 and indicated that at Δt = 10 µs a covalent thioether bond is established between reactive Cys57 and its flavin mononucleotide cofactor. This experiment validates the crystals to be suitable for in-depth follow-up studies of this still poorly understood signal-transduction mechanism. Importantly, the fixed-target delivery system also permitted a tenfold reduction in protein sample consumption compared with the more common high-viscosity extrusion-based delivery system. This development creates the prospect of an increase in XFEL project throughput for the field.

Identifiants

pubmed: 38980142
pii: S2052252524005591
doi: 10.1107/S2052252524005591
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Narodowe Centrum Nauki
ID : UMO-2021/03/H/NZ1/00002
Organisme : Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
ID : PZ00P3_174169
Organisme : Horizon 2020 Framework Programme
ID : 701647

Informations de copyright

open access.

Auteurs

Guillaume Gotthard (G)

Laboratory of Biomolecular Research, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Andrea Flores-Ibarra (A)

Dioscuri Center for Structural Dynamics of Receptors, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-380 Krakow, Poland.

Melissa Carrillo (M)

Laboratory of Nanoscale Biology, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Michal W Kepa (MW)

Laboratory of Biomolecular Research, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Thomas J Mason (TJ)

Laboratory of Biomolecular Research, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Dennis P Stegmann (DP)

Swiss Light Source, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Bence Olasz (B)

Dioscuri Center for Structural Dynamics of Receptors, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-380 Krakow, Poland.

Magdalena Pachota (M)

Dioscuri Center for Structural Dynamics of Receptors, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-380 Krakow, Poland.

Florian Dworkowski (F)

Laboratory for Synchrotron Radiation and Femtochemistry, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Dmitry Ozerov (D)

Science IT Infrastructure and Services, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Bill F Pedrini (BF)

Laboratory for X-ray Nanoscience and Technologies, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Celestino Padeste (C)

Laboratory of Nanoscale Biology, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

John H Beale (JH)

Swiss Light Source, Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen, Switzerland.

Przemyslaw Nogly (P)

Institute of Molecular Biology and Biophysics, ETH Zurich, Rämistrasse 101, 8092 Zürich, Switzerland.

Classifications MeSH