A supervised multiclass framework for mineral classification of Iberian beads.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 27 11 2023
accepted: 09 04 2024
medline: 10 7 2024
pubmed: 10 7 2024
entrez: 10 7 2024
Statut: epublish

Résumé

Research on personal adornments depends on the reliable characterisation of materials to trace provenance and model complex social networks. However, many analytical techniques require the transfer of materials from the museum to the laboratory, involving high insurance costs and limiting the number of items that can be analysed, making the process of empirical data collection a complicated, expensive and time-consuming routine. In this study, we compiled the largest geochemical dataset of Iberian personal adornments (n = 1243 samples) by coupling X-ray fluorescence compositional data with their respective X-ray diffraction mineral labels. This allowed us to develop a machine learning-based framework for the prediction of bead-forming minerals by training and benchmarking 13 of the most widely used supervised algorithms. As a proof of concept, we developed a multiclass model and evaluated its performance on two assemblages from different Portuguese sites with current mineralogical characterisation: Cova das Lapas (n = 15 samples) and Gruta da Marmota (n = 10 samples). Our results showed that decisión-tres based classifiers outperformed other classification logics given the discriminative importance of some chemical elements in determining the mineral phase, which fits particularly well with the decision-making process of this type of model. The comparison of results between the different validation sets and the proof-of-concept has highlighted the risk of using synthetic data to handle imbalance and the main limitation of the framework: its restrictive class system. We conclude that the presented approach can successfully assist in the mineral classification workflow when specific analyses are not available, saving time and allowing a transparent and straightforward assessment of model predictions. Furthermore, we propose a workflow for the interpretation of predictions using the model outputs as compound responses enabling an uncertainty reduction approach currently used by our team. The Python-based framework is packaged in a public repository and includes all the necessary resources for its reusability without the need for any installation.

Identifiants

pubmed: 38985774
doi: 10.1371/journal.pone.0302563
pii: PONE-D-23-39546
doi:

Substances chimiques

Minerals 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0302563

Informations de copyright

Copyright: © 2024 Sanchez-Gomez et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper

Auteurs

Daniel Sanchez-Gomez (D)

Centro de Arqueologia da Universidade de Lisboa (UNIARQ), Lisbon, Portugal.

Carlos P Odriozola Lloret (CP)

Centro de Arqueologia da Universidade de Lisboa (UNIARQ), Lisbon, Portugal.
Dpto. de Prehistoria y Arqueología, Universidad de Sevilla, Seville, Spain.

Ana Catarina Sousa (AC)

Centro de Arqueologia da Universidade de Lisboa (UNIARQ), Lisbon, Portugal.

José Ángel Garrido-Cordero (JÁ)

Dpto. de Prehistoria y Arqueología, Universidad de Sevilla, Seville, Spain.

Galo Romero-García (G)

Dpto. de Prehistoria y Arqueología, Universidad de Sevilla, Seville, Spain.

José María Martínez-Blanes (JM)

Instituto de Ciencia de Materiales de Sevilla, Universidad de Sevilla- Consejo Superior de Investigaciones Científicas, Seville, Spain.
Dpto. de Química Inorgánica, Universidad de Sevilla, Seville, Spain.

Manel Edo I Benaiges (M)

Institut d'Arqueologia, Universitat de Barcelona, Barcelona, Spain.

Rodrigo Villalobos-García (R)

Cuerpo de Profesores de Enseñanza Secundaria, Gobierno de Cantabria, Cantabria, Spain.

Victor S Gonçalves (VS)

Centro de Arqueologia da Universidade de Lisboa (UNIARQ), Lisbon, Portugal.

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