KCL TEST: an open-source inspired asymptomatic SARS-CoV-2 surveillance programme in an academic institution.

COVID-19 diagnostics health equity molecular testing open-source pandemic preparedness

Journal

Biology methods & protocols
ISSN: 2396-8923
Titre abrégé: Biol Methods Protoc
Pays: England
ID NLM: 101693064

Informations de publication

Date de publication:
2024
Historique:
received: 20 02 2024
revised: 10 05 2024
accepted: 21 06 2024
medline: 12 7 2024
pubmed: 12 7 2024
entrez: 12 7 2024
Statut: epublish

Résumé

Rapid and accessible testing was paramount in the management of the COVID-19 pandemic. Our university established KCL TEST: a SARS-CoV-2 asymptomatic testing programme that enabled sensitive and accessible PCR testing of SARS-CoV-2 RNA in saliva. Here, we describe our learnings and provide our blueprint for launching diagnostic laboratories, particularly in low-resource settings. Between December 2020 and July 2022, we performed 158277 PCRs for our staff, students, and their household contacts, free of charge. Our average turnaround time was 16 h and 37 min from user registration to result delivery. KCL TEST combined open-source automation and in-house non-commercial reagents, which allows for rapid implementation and repurposing. Importantly, our data parallel those of the UK Office for National Statistics, though we detected a lower positive rate and virtually no delta wave. Our observations strongly support regular asymptomatic community testing as an important measure for decreasing outbreaks and providing safe working spaces. Universities can therefore provide agile, resilient, and accurate testing that reflects the infection rate and trend of the general population. Our findings call for the early integration of academic institutions in pandemic preparedness, with capabilities to rapidly deploy highly skilled staff, as well as develop, test, and accommodate efficient low-cost pipelines.

Identifiants

pubmed: 38993523
doi: 10.1093/biomethods/bpae046
pii: bpae046
pmc: PMC11238426
doi:

Types de publication

Journal Article

Langues

eng

Pagination

bpae046

Informations de copyright

© The Author(s) 2024. Published by Oxford University Press.

Auteurs

Joana Reis de Andrade (J)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Edward Scourfield (E)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Shilpa Lekhraj Peswani-Sajnani (SL)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Kate Poulton (K)

Department of Infectious Diseases, King's College London, London, UK.

Thomas Ap Rees (T)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Paniz Khooshemehri (P)

Department of Infectious Diseases, King's College London, London, UK.

George Doherty (G)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.
Department of Infectious Diseases, King's College London, London, UK.

Stephanie Ong (S)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.
Department of Infectious Diseases, King's College London, London, UK.

Iustina-Francisca Ivan (IF)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.
Department of Infectious Diseases, King's College London, London, UK.

Negin Goudarzi (N)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.
Department of Infectious Diseases, King's College London, London, UK.

Isaac Gardiner (I)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Estelle Caine (E)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Thomas J A Maguire (TJA)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.
Department of Infectious Diseases, King's College London, London, UK.

Daniel Leightley (D)

Department of Population Health Sciences, School of Life Course & Population Sciences, Faculty of Life Sciences & Medicine, King's College London, London, UK.

Luis Torrico (L)

Torrysoft, Madrid, Spain.

Alex Gasulla (A)

Innovartium, Barcelona, Spain.

Angel Menendez-Vazquez (A)

Peter Gorer Department of Immunobiology, King's College London, London, UK.

Ana Maria Ortega-Prieto (AM)

Department of Infectious Diseases, King's College London, London, UK.

Suzanne Pickering (S)

Department of Infectious Diseases, King's College London, London, UK.

Jose M Jimenez-Guardeño (JM)

Department of Infectious Diseases, King's College London, London, UK.

Rahul Batra (R)

Guy's and St Thomas' NHS Foundation Trust, London, UK.

Sona Rubinchik (S)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Aaron V F Tan (AVF)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Amy Griffin (A)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

David Sherrin (D)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Stelios Papaioannou (S)

Department of Infectious Diseases, King's College London, London, UK.

Celine Trouillet (C)

Department of Infectious Diseases, King's College London, London, UK.

Hannah E Mischo (HE)

Department of Infectious Diseases, King's College London, London, UK.

Victoriano Giralt (V)

Area de Sistemas, Servicio Central de Informática, University of Malaga, Malaga, Spain.

Samantha Wilson (S)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Martin Kirk (M)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Stuart J D Neil (SJD)

Department of Infectious Diseases, King's College London, London, UK.

Rui Pedro Galao (RP)

Department of Infectious Diseases, King's College London, London, UK.

Jo Martindale (J)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Charles Curtis (C)

Research Management and Innovation Directorate, KCL TEST, King's College London, London, UK.

Mark Zuckerman (M)

South London Specialist Virology Centre, King's College Hospital, London, UK.

Reza Razavi (R)

School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK.

Michael H Malim (MH)

Department of Infectious Diseases, King's College London, London, UK.

Rocio T Martinez-Nunez (RT)

Department of Infectious Diseases, King's College London, London, UK.

Classifications MeSH