Canine Cancer Diagnostics by X-ray Diffraction of Claws.

ROC curve X-ray diffraction canine cancer early cancer diagnostics keratin structure structural biomarkers

Journal

Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829

Informations de publication

Date de publication:
30 Jun 2024
Historique:
received: 27 05 2024
revised: 26 06 2024
accepted: 28 06 2024
medline: 13 7 2024
pubmed: 13 7 2024
entrez: 13 7 2024
Statut: epublish

Résumé

We report the results of X-ray diffraction (XRD) measurements of the dogs' claws and show the feasibility of using this approach for early, non-invasive cancer detection. The obtained two-dimensional XRD patterns can be described by Fourier coefficients, which were calculated for the radial and circular (angular) directions. We analyzed these coefficients using the supervised learning algorithm, which implies optimization of the random forest classifier by using samples from the training group and following the calculation of mean cancer probability per patient for the blind dataset. The proposed algorithm achieved a balanced accuracy of 85% and ROC-AUC of 0.91 for a blind group of 68 dogs. The transition from samples to patients additionally improved the ROC-AUC by 10%. The best specificity and sensitivity values for 68 patients were 97.4% and 72.4%, respectively. We also found that the structural parameter (biomarker) most important for the diagnostics is the intermolecular distance.

Identifiants

pubmed: 39001484
pii: cancers16132422
doi: 10.3390/cancers16132422
pii:
doi:

Types de publication

Journal Article

Langues

eng

Auteurs

Alexander Alekseev (A)

Matur UK Ltd., 5 New Street Square, London EC4A 3TW, UK.

Delvin Yuk (D)

Arion Diagnostics, Inc., 911 Mustang Ct, Petaluma, CA 94954, USA.

Alexander Lazarev (A)

Arion Diagnostics, Inc., 911 Mustang Ct, Petaluma, CA 94954, USA.

Daizie Labelle (D)

Arion Diagnostics, Inc., 911 Mustang Ct, Petaluma, CA 94954, USA.

Lev Mourokh (L)

Physics Department, Queens College of the City University of New York, 65-30 Kissena Blvd, Flushing, NY 11367, USA.

Pavel Lazarev (P)

Matur UK Ltd., 5 New Street Square, London EC4A 3TW, UK.
Arion Diagnostics, Inc., 911 Mustang Ct, Petaluma, CA 94954, USA.

Classifications MeSH