Comparative Performance Evaluation of Random Access and Real-time PCR Techniques in the Diagnosis of BK Virus Infections in Transplant Patients.

BKPyV correlation analysis diagnosis nucleic acid testing viral load

Journal

Indian journal of medical microbiology
ISSN: 1998-3646
Titre abrégé: Indian J Med Microbiol
Pays: United States
ID NLM: 8700903

Informations de publication

Date de publication:
27 Jul 2024
Historique:
received: 16 04 2024
revised: 24 06 2024
accepted: 24 07 2024
medline: 30 7 2024
pubmed: 30 7 2024
entrez: 29 7 2024
Statut: aheadofprint

Résumé

The study aims to compare random-access NeuMoDx values with artus qPCR values to validate the accuracy of NeuMoDx as an alternative to qPCR and provide an equation to convert copies/ml to IU/ml measurements. A total of 95 samples, including 61 transplant patient samples (n=23 urine, n=38 plasma) as the study group, 28 BKPyV-free samples as the control group, and six quality control samples, were included. One-Way ANOVA, Pearson correlation, Bland-Altman, Passing-Bablok, Deming regression analyses were used for statistical evaluation. Of 95 samples, 46 (48%) were positive with NeuMoDx, while 40 (42%) were positive with artus qPCR. Both techniques were statistically similar (p>0.05). Deming correlation analysis (r=0.9590), Passing Bablok and Bland Altman analyses demonstrated a strong correlation between NeuMoDx and artus values. The equation that provides the conversion between NeuMoDx and artus qPCR values was NeuMoDx= (1.12965 x artus qPCR) - 0.55016. BKPyV infections remain a concern for transplant patients globally, and effective new diagnostic methods are required. Consistency between the results of NeuMoDx and qPCR confirms that NeuMoDx may be a valuable alternative for detecting BKPyV to prevent viral propagation. Our findings may allow converting copy/ml results to IU/ml for diagnosing and monitoring BKPyV infections in transplant patients.

Identifiants

pubmed: 39074768
pii: S0255-0857(24)00162-2
doi: 10.1016/j.ijmmb.2024.100687
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

100687

Informations de copyright

Copyright © 2024 Indian Association of Medical Microbiologists. Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest ☒ The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. ☐ The authors declare the following financial interests/personal relationships which may be considered as potential competing interests:

Auteurs

Erdal Sanlidag (E)

Near East University, DESAM Research Institute, Nicosia 99138, Mersin 10, Turkey. Electronic address: esanlidag@gmail.com.

Ayse Arikan (A)

Near East University, DESAM Research Institute, Nicosia 99138, Mersin 10, Turkey; Near East University, Department of Medical Microbiology and Clinical Microbiology, Mersin 10, Turkey; Kyrenia University, Department of Medical Microbiology and Clinical Microbiology, Kyrenia 99320, Mersin 10, Turkey. Electronic address: ayse.arikansarioglu@neu.edu.tr.

Murat Sayan (M)

Near East University, DESAM Research Institute, Nicosia 99138, Mersin 10, Turkey; Kocaeli University, Research and Education Hospital, PCR Unit, Kocaeli, Turkey. Electronic address: murat.sayan@kocaeli.edu.tr.

Classifications MeSH