Phase II study of talazoparib in advanced cancers with BRCA1/2, DNA repair, and PTEN alterations.


Journal

NPJ precision oncology
ISSN: 2397-768X
Titre abrégé: NPJ Precis Oncol
Pays: England
ID NLM: 101708166

Informations de publication

Date de publication:
31 Jul 2024
Historique:
received: 25 08 2023
accepted: 09 07 2024
medline: 1 8 2024
pubmed: 1 8 2024
entrez: 31 7 2024
Statut: epublish

Résumé

Cancer cells with BRCA1/2 deficiencies are sensitive to poly (ADP-ribose) polymerase (PARP) inhibitors. We evaluated the efficacy of talazoparib in DNA-Damage Repair (DDR)-altered patients. In this phase II trial, patients were enrolled onto one of four cohorts based on molecular alterations: (1) somatic BRCA1/2, (2) other homologous recombination repair pathway, (3) PTEN and (4) germline BRCA1/2. The primary endpoint was a clinical benefit rate (CBR): complete response, partial response or stable disease ≥24 weeks. 79 patients with a median of 4 lines of therapy were enrolled. CBR for cohorts 1-4 were: 32.5%, 19.7%, 9.4% and 30.6%, respectively. PTEN mutations correlated with reduced survival and a trend towards shorter time to progression.Talazoparib demonstrated clinical benefit in selected DDR-altered patients. PTEN mutations/loss patients derived limited clinical benefit. Further study is needed to determine whether PTEN is prognostic or predictive of response to PARP inhibitors.

Identifiants

pubmed: 39085400
doi: 10.1038/s41698-024-00634-6
pii: 10.1038/s41698-024-00634-6
doi:

Types de publication

Journal Article

Langues

eng

Pagination

166

Informations de copyright

© 2024. The Author(s).

Références

Birkelbach, M. et al. Detection of impaired homologous recombination repair in NSCLC cells and tissues. J. Thorac. Oncol. 8, 279–286 (2013).
pubmed: 23399959 pmcid: 3573529 doi: 10.1097/JTO.0b013e31827ecf83
Hennessy, B. T. et al. Somatic mutations in BRCA1 and BRCA2 could expand the number of patients that benefit from poly (ADP ribose) polymerase inhibitors in ovarian cancer. J. Clin. Oncol. 28, 3570–3576 (2010).
pubmed: 20606085 pmcid: 2917312 doi: 10.1200/JCO.2009.27.2997
George, J. et al. Nonequivalent gene expression and copy number alterations in high-grade serous ovarian cancers with BRCA1 and BRCA2 mutations. Clin. Cancer Res. 19, 3474-3484 (2013).
Gorringe, K. L. et al. Copy number analysis identifies novel interactions between genomic loci in ovarian cancer. PLoS One 5, e11408 (2010).
Konishi, H. et al. Mutation of a single allele of the cancer susceptibility gene BRCA1 leads to genomic instability in human breast epithelial cells. Proc. Natl. Acad. Sci. USA 108, 17773–17778 (2011).
pubmed: 21987798 pmcid: 3203756 doi: 10.1073/pnas.1110969108
Fong, P. C. et al. Inhibition of poly(ADP-ribose) polymerase in tumors from BRCA mutation carriers. N. Engl. J. Med. 361, 123–134 (2009).
pubmed: 19553641 doi: 10.1056/NEJMoa0900212
Kummar, S. et al. A phase I study of veliparib in combination with metronomic cyclophosphamide in adults with refractory solid tumors and lymphomas. Clin. Cancer Res. 18, 1726–1734 (2012).
pubmed: 22307137 pmcid: 3306481 doi: 10.1158/1078-0432.CCR-11-2821
Stefansson, O. A. et al. Genomic profiling of breast tumours in relation to BRCA abnormalities and phenotypes. Breast Cancer Res. 11, R47 (2009).
pubmed: 19589159 pmcid: 2750106 doi: 10.1186/bcr2334
Buisson, R. et al. Cooperation of breast cancer proteins PALB2 and piccolo BRCA2 in stimulating homologous recombination. Nat. Struct. Mol. Biol. 17, 1247–1254 (2010).
pubmed: 20871615 pmcid: 4094107 doi: 10.1038/nsmb.1915
Chen, P. et al. Association of common PALB2 polymorphisms with breast cancer risk: a case-control study. Clin. Cancer Res. 14, 5931–5937 (2008).
pubmed: 18794107 doi: 10.1158/1078-0432.CCR-08-0429
Gilardini Montani, M. S. et al. ATM-depletion in breast cancer cells confers sensitivity to PARP inhibition. J. Exp. Clin. Cancer Res. 32, 95 (2013).
pubmed: 24252502 pmcid: 4176289 doi: 10.1186/1756-9966-32-95
Evans, K. W. et al. A population of heterogeneous breast cancer patient-derived xenografts demonstrate broad activity of PARP inhibitor in BRCA1/2 wild-type tumors. Clin. Cancer Res. 23, 6468–6477 (2017).
pubmed: 29093017 pmcid: 5679124 doi: 10.1158/1078-0432.CCR-17-0615
Howlett, N. G. et al. Biallelic inactivation of BRCA2 in Fanconi anemia. Science 297, 606–609 (2002).
pubmed: 12065746 doi: 10.1126/science.1073834
Mathew, C. G. Fanconi anaemia genes and susceptibility to cancer. Oncogene 25, 5875–5884 (2006).
pubmed: 16998502 doi: 10.1038/sj.onc.1209878
Chu, E. C. & Tarnawski, A. S. PTEN regulatory functions in tumor suppression and cell biology. Med Sci. Monit. 10, RA235–RA241 (2004).
pubmed: 15448614
Mendes-Pereira, A. M. et al. Synthetic lethal targeting of PTEN mutant cells with PARP inhibitors. EMBO Mol. Med. 1, 315–322 (2009).
pubmed: 20049735 pmcid: 3378149 doi: 10.1002/emmm.200900041
McEllin, B. et al. PTEN loss compromises homologous recombination repair in astrocytes: implications for glioblastoma therapy with temozolomide or poly(ADP-ribose) polymerase inhibitors. Cancer Res. 70, 5457–5464 (2010).
pubmed: 20530668 pmcid: 2896430 doi: 10.1158/0008-5472.CAN-09-4295
Gupta, A. et al. Cell cycle checkpoint defects contribute to genomic instability in PTEN deficient cells independent of DNA DSB repair. Cell Cycle 8, 2198–2210 (2009).
pubmed: 19502790 doi: 10.4161/cc.8.14.8947
Peng, G. et al. Genome-wide transcriptome profiling of homologous recombination DNA repair. Nat. Commun. 5, 3361 (2014).
pubmed: 24553445 doi: 10.1038/ncomms4361
Lord, C. J. & Ashworth, A. BRCAness revisited. Nat. Rev. Cancer 16, 110–120 (2016).
pubmed: 26775620 doi: 10.1038/nrc.2015.21
Pilie, P. G. et al. PARP inhibitors: extending benefit beyond BRCA-mutant cancers. Clin. Cancer Res. 25, 3759–3771 (2019).
pubmed: 30760478 doi: 10.1158/1078-0432.CCR-18-0968
Murai, J. et al. Trapping of PARP1 and PARP2 by clinical PARP inhibitors. Cancer Res. 72, 5588–5599 (2012).
pubmed: 23118055 pmcid: 3528345 doi: 10.1158/0008-5472.CAN-12-2753
Hoy, S. M. Talazoparib: first global approval. Drugs 78, 1939–1946 (2018).
pubmed: 30506138 doi: 10.1007/s40265-018-1026-z
Shen, Y. et al. BMN 673, a novel and highly potent PARP1/2 inhibitor for the treatment of human cancers with DNA repair deficiency. Clin. Cancer Res. 19, 5003–5013 (2013).
pubmed: 23881923 pmcid: 6485449 doi: 10.1158/1078-0432.CCR-13-1391
Murai, J. et al. Stereospecific PARP trapping by BMN 673 and comparison with Olaparib and Rucaparib. Mol. Cancer Ther. 13, 433–443 (2014).
pubmed: 24356813 doi: 10.1158/1535-7163.MCT-13-0803
Golan, T. et al. Maintenance Olaparib for germline BRCA-mutated metastatic pancreatic cancer. N. Engl. J. Med. 381, 317–327 (2019).
pubmed: 31157963 pmcid: 6810605 doi: 10.1056/NEJMoa1903387
Heeke, A. L., et al. Prevalence of homologous recombination-related gene mutations across multiple cancer types. JCO Precis. Oncol. 2018 https://doi.org/10.1200/PO.17.00286 (2018).
Robinson, D. et al. Integrative clinical genomics of advanced prostate cancer. Cell 162, 454 (2015).
pubmed: 28843286 doi: 10.1016/j.cell.2015.06.053
Agarwal, N. et al. Plain language summary of the design of the TALAPRO-2 study comparing talazoparib and enzalutamide versus enzalutamide and placebo in men with metastatic castration-resistant prostate cancer. Future Oncol. 18, 2979–2986 (2022).
doi: 10.2217/fon-2022-0389
Agarwal, N. et al. Talazoparib plus enzalutamide in men with first-line metastatic castration-resistant prostate cancer (TALAPRO-2): a randomised, placebo-controlled, phase 3 trial. Lancet 402, 291–303 (2023).
pubmed: 37285865 doi: 10.1016/S0140-6736(23)01055-3
Tung, N. M. et al. TBCRC 048: phase II study of olaparib for metastatic breast cancer and mutations in homologous recombination-related genes. J. Clin. Oncol. 38, 4274–4282 (2020).
pubmed: 33119476 doi: 10.1200/JCO.20.02151
Gruber, J. J. et al. A phase II study of talazoparib monotherapy in patients with wild-type BRCA1 and BRCA2 with a mutation in other homologous recombination genes. Nat. Cancer 3, 1181–1191 (2022).
pubmed: 36253484 pmcid: 9586861 doi: 10.1038/s43018-022-00439-1
Gelmon, K. A. et al. Olaparib in patients with recurrent high-grade serous or poorly differentiated ovarian carcinoma or triple-negative breast cancer: a phase 2, multicentre, open-label, non-randomised study. Lancet Oncol. 12, 852–861 (2011).
pubmed: 21862407 doi: 10.1016/S1470-2045(11)70214-5
de Bono, J. et al. Phase I, dose-escalation, two-part trial of the PARP inhibitor talazoparib in patients with advanced germline BRCA1/2 mutations and selected sporadic cancers. Cancer Discov. 7, 620–629 (2017).
pubmed: 28242752 pmcid: 5905335 doi: 10.1158/2159-8290.CD-16-1250
Mateo, J. et al. DNA-repair defects and olaparib in metastatic prostate cancer. N. Engl. J. Med. 373, 1697–1708 (2015).
pubmed: 26510020 pmcid: 5228595 doi: 10.1056/NEJMoa1506859
Shen, W. H. et al. Essential role for nuclear PTEN in maintaining chromosomal integrity. Cell 128, 157–170 (2007).
pubmed: 17218262 doi: 10.1016/j.cell.2006.11.042
Minami, D. et al. Synergistic effect of olaparib with combination of cisplatin on PTEN-deficient lung cancer cells. Mol. Cancer Res. 11, 140–148 (2013).
pubmed: 23239809 doi: 10.1158/1541-7786.MCR-12-0401
Westin, S. N. et al. Phase Ib dose expansion and translational analyses of olaparib in combination with capivasertib in recurrent endometrial, triple-negative breast, and ovarian cancer. Clin. Cancer Res. 27, 6354–6365 (2021).
pubmed: 34518313 pmcid: 8639651 doi: 10.1158/1078-0432.CCR-21-1656
Bian, X., et al. PTEN deficiency sensitizes endometrioid endometrial cancer to compound PARP-PI3K inhibition but not PARP inhibition as monotherapy. Oncogene (2017).
Juvekar, A. et al. Combining a PI3K inhibitor with a PARP inhibitor provides an effective therapy for BRCA1-related breast cancer. Cancer Discov. 2, 1048–1063 (2012).
pubmed: 22915751 pmcid: 3733368 doi: 10.1158/2159-8290.CD-11-0336
Matulonis, U. A. & Monk, B. J. PARP inhibitor and chemotherapy combination trials for the treatment of advanced malignancies: does a development pathway forward exist? Ann. Oncol. 28, 443–447 (2017).
pubmed: 28057663 doi: 10.1093/annonc/mdw697
Johnson, A. et al. The right drugs at the right time for the right patient: the MD Anderson Precision Oncology Decision Support Platform. Drug Discov. Today 20, 1433–1438 (2015).
pubmed: 26148707 pmcid: 5648066 doi: 10.1016/j.drudis.2015.05.013
Djordjevic, B. et al. Clinical assessment of PTEN loss in endometrial carcinoma: immunohistochemistry outperforms gene sequencing. Mod. Pathol. 25, 699–708 (2012).
pubmed: 22301702 pmcid: 3341518 doi: 10.1038/modpathol.2011.208
Meric-Bernstam, F. et al. Influence of biospecimen variables on proteomic biomarkers in breast cancer. Clin. Cancer Res. 20, 3870–3883 (2014).
pubmed: 24895461 pmcid: 4112583 doi: 10.1158/1078-0432.CCR-13-1507
Detre, S., Saclani Jotti, G. & Dowsett, M. A “quickscore” method for immunohistochemical semiquantitation: validation for oestrogen receptor in breast carcinomas. J. Clin. Pathol. 48, 876–878 (1995).
pubmed: 7490328 pmcid: 502883 doi: 10.1136/jcp.48.9.876
Cibulskis, K. et al. Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat. Biotechnol. 31, 213–219 (2013).
pubmed: 23396013 pmcid: 3833702 doi: 10.1038/nbt.2514
Rimmer, A. et al. Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications. Nat. Genet 46, 912–918 (2014).
pubmed: 25017105 pmcid: 4753679 doi: 10.1038/ng.3036
Ye, K. et al. Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads. Bioinformatics 25, 2865–2871 (2009).
pubmed: 19561018 pmcid: 2781750 doi: 10.1093/bioinformatics/btp394
Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754–1760 (2009).
pubmed: 19451168 pmcid: 2705234 doi: 10.1093/bioinformatics/btp324
DePristo, M. A. et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet 43, 491–498 (2011).
pubmed: 21478889 pmcid: 3083463 doi: 10.1038/ng.806
Zhang, J. et al. Intratumor heterogeneity in localized lung adenocarcinomas delineated by multiregion sequencing. Science 346, 256–259 (2014).
pubmed: 25301631 pmcid: 4354858 doi: 10.1126/science.1256930
Olshen, A. B. et al. Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5, 557–572 (2004).
pubmed: 15475419 doi: 10.1093/biostatistics/kxh008
Simon, R. Optimal two-stage designs for phase II clinical trials. Control Clin. Trials 10, 1–10 (1989).
pubmed: 2702835 doi: 10.1016/0197-2456(89)90015-9
Thall, P. F., Simon, R. M. & Estey, E. H. Bayesian sequential monitoring designs for single-arm clinical trials with multiple outcomes. Stat. Med 14, 357–379 (1995).
pubmed: 7746977 doi: 10.1002/sim.4780140404
Kaplan, E. L. & Meier Nonparametric estimation from incomplete observations. J. Am. Stat. Assoc. 53, 457–481 (1958).
doi: 10.1080/01621459.1958.10501452
Piha-Paul, S. A., et al. Supplemental Data for A Phase II Study of Talazoparib Tosylate in Advanced Cancer Patients with Somatic and Germline (Not Breast or Ovarian Cancer) Alterations of BRCA1/2, Mutations/Deletions/Amplification in Other Homologous Recombination Repair Pathway Genes and PTEN or PTEN loss. https://doi.org/10.52519/00133 .

Auteurs

Sarina A Piha-Paul (SA)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA. spihapau@mdanderson.org.

Chieh Tseng (C)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Cheuk Hong Leung (CH)

Department of Biostatistics, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Ying Yuan (Y)

Department of Biostatistics, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Daniel D Karp (DD)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Vivek Subbiah (V)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

David Hong (D)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Siqing Fu (S)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Aung Naing (A)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Jordi Rodon (J)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Milind Javle (M)

Department of Gastrointestinal Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Jaffer A Ajani (JA)

Department of Gastrointestinal Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Kanwal P Raghav (KP)

Department of Gastrointestinal Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Neeta Somaiah (N)

Department of Sarcoma Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Gordon B Mills (GB)

Knight Cancer Institute, Oregon Health Sciences University, Portland, OR, USA.

Apostolia M Tsimberidou (AM)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Xiaofeng Zheng (X)

Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Ken Chen (K)

Department of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Funda Meric-Bernstam (F)

Department of Investigational Cancer Therapeutics (A Phase I Clinical Trials Program), University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Department of Breast Surgical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, USA.
The Sheikh Khalifa Bin Zayed Al Nahyan Institute for Personalized Cancer Therapy, University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Classifications MeSH