GelBox: Open-source software to improve rigor and reproducibility when analyzing gels and immunoblots.
Gel Electrophoresis
Image analysis
Immunoblotting
Rigor
Software
Journal
American journal of physiology. Heart and circulatory physiology
ISSN: 1522-1539
Titre abrégé: Am J Physiol Heart Circ Physiol
Pays: United States
ID NLM: 100901228
Informations de publication
Date de publication:
02 Aug 2024
02 Aug 2024
Historique:
medline:
2
8
2024
pubmed:
2
8
2024
entrez:
2
8
2024
Statut:
aheadofprint
Résumé
GelBox is open-source software that was developed with the goal of enhancing rigor, reproducibility, and transparency when analyzing gels and immunoblots. It combines image adjustments (cropping, rotation, brightness, and contrast), background correction, and band-fitting in a single application. Users can also associate each lane in an image with metadata (for example, sample type). GelBox data files integrate the raw data, supplied metadata, image adjustments, and band-level analyses in a single file to improve traceability. GelBox has a user-friendly interface and was developed using MATLAB. The software, installation instructions, and tutorials, are available at https://campbell-muscle-lab.github.io/GelBox/.
Identifiants
pubmed: 39092999
doi: 10.1152/ajpheart.00144.2024
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM