Developments and applications of the OPTIMADE API for materials discovery, design, and data exchange.


Journal

Digital discovery
ISSN: 2635-098X
Titre abrégé: Digit Discov
Pays: England
ID NLM: 9918351186906676

Informations de publication

Date de publication:
07 Aug 2024
Historique:
received: 02 02 2024
accepted: 15 04 2024
medline: 9 8 2024
pubmed: 9 8 2024
entrez: 9 8 2024
Statut: epublish

Résumé

The Open Databases Integration for Materials Design (OPTIMADE) application programming interface (API) empowers users with holistic access to a growing federation of databases, enhancing the accessibility and discoverability of materials and chemical data. Since the first release of the OPTIMADE specification (v1.0), the API has undergone significant development, leading to the v1.2 release, and has underpinned multiple scientific studies. In this work, we highlight the latest features of the API format, accompanying software tools, and provide an update on the implementation of OPTIMADE in contributing materials databases. We end by providing several use cases that demonstrate the utility of the OPTIMADE API in materials research that continue to drive its ongoing development.

Identifiants

pubmed: 39118978
doi: 10.1039/d4dd00039k
pii: d4dd00039k
pmc: PMC11305395
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1509-1533

Informations de copyright

This journal is © The Royal Society of Chemistry.

Déclaration de conflit d'intérêts

G. J. C. is a shareholder and Director of Intellegens Ltd. G.-M. R. is a shareholder and Chief Innovation Officer of Matgenix SRL. E. B. is a shareholder and Director of Materials Platform for Data Science OÜ.

Auteurs

Matthew L Evans (ML)

UCLouvain, Institut de la Matière Condensée et des Nanosciences (IMCN) Chemin des Étoiles 8, Louvain-la-Neuve 1348 Belgium gian-marco.rignanese@uclouvain.be.
Matgenix SRL 185 Rue Armand Bury 6534 Gozée Belgium.

Johan Bergsma (J)

Centre Européen de Calcul Atomique et Moléculaire (CECAM), École Polytechnique Fédérale de Lausanne Avenue de Forel 3 1015 Lausanne Switzerland.

Andrius Merkys (A)

Institute of Biotechnology, Life Sciences Center, Vilnius University Saulėtekio av. 7 LT-10257 Vilnius Lithuania.

Casper W Andersen (CW)

SINTEF P.O. Box 4760 Torgarden NO-7465 Trondheim Norway.

Oskar B Andersson (OB)

Materials Design and Informatics Unit, Department of Physics, Chemistry and Biology, Linköping University Sweden rickard.armiento@liu.se.

Daniel Beltrán (D)

Institute for Research in Biomedicine (IRB Barcelona) Baldiri i Reixac 10-12 08028 Barcelona Spain.

Evgeny Blokhin (E)

Tilde Materials Informatics Straßmannstraße 25 10249 Berlin Germany.
Materials Platform for Data Science Sepapaja 6 15551 Tallinn Estonia.

Tara M Boland (TM)

Computational Atomic-Scale Materials Design, Technical University of Denmark Kgs. Lyngby Denmark.

Rubén Castañeda Balderas (R)

Centro de Investigación en Materiales Avanzados, S.C. (CIMAV) Av. Miguel de Cervantes 120, Complejo Industrial Chihuahua 31136 Chihuahua Chih. Mexico.

Kamal Choudhary (K)

Material Measurement Laboratory, National Institute of Standards and Technology Gaithersburg MD 20899 USA.

Alberto Díaz Díaz (A)

Centro de Investigación en Materiales Avanzados, S.C. (CIMAV) Av. Miguel de Cervantes 120, Complejo Industrial Chihuahua 31136 Chihuahua Chih. Mexico.

Rodrigo Domínguez García (R)

Centro de Investigación en Materiales Avanzados, S.C. (CIMAV) Av. Miguel de Cervantes 120, Complejo Industrial Chihuahua 31136 Chihuahua Chih. Mexico.

Hagen Eckert (H)

Department of Mechanical Engineering and Materials Science, Duke University Durham NC 27708 USA.
Center for Extreme Materials, Duke University Durham NC 27708 USA.

Kristjan Eimre (K)

Theory and Simulation of Materials (THEOS), and National Centre for Computational Design and Discovery of Novel Materials (MARVEL), École Polytechnique Fédérale de Lausanne 1015 Lausanne Switzerland.

María Elena Fuentes Montero (ME)

Universidad Autónoma de Chihuahua, Facultad de Ciencias Quimicas 31125 Chihuahua Mexico.

Adam M Krajewski (AM)

Department of Materials Science and Engineering, The Pennsylvania State University, University Park PA 16802 USA.

Jens Jørgen Mortensen (JJ)

Computational Atomic-Scale Materials Design, Technical University of Denmark Kgs. Lyngby Denmark.

José Manuel Nápoles Duarte (JM)

Universidad Autónoma de Chihuahua, Facultad de Ciencias Quimicas 31125 Chihuahua Mexico.

Jacob Pietryga (J)

Department of Materials Science and Engineering, Northwestern University Evanston IL 60208 USA.

Ji Qi (J)

Department of NanoEngineering, University of California, San Diego 9500 Gilman Drive, La Jolla California 92093-0448 USA.

Felipe de Jesús Trejo Carrillo (FJ)

Centro de Investigación en Materiales Avanzados, S.C. (CIMAV) Av. Miguel de Cervantes 120, Complejo Industrial Chihuahua 31136 Chihuahua Chih. Mexico.

Antanas Vaitkus (A)

Institute of Biotechnology, Life Sciences Center, Vilnius University Saulėtekio av. 7 LT-10257 Vilnius Lithuania.

Jusong Yu (J)

Theory and Simulation of Materials (THEOS), and National Centre for Computational Design and Discovery of Novel Materials (MARVEL), École Polytechnique Fédérale de Lausanne 1015 Lausanne Switzerland.
Laboratory for Materials Simulations (LMS), Paul Scherrer Institute (PSI) 5232 Villigen PSI Switzerland.

Adam Zettel (A)

Department of Mechanical Engineering and Materials Science, Duke University Durham NC 27708 USA.
Center for Extreme Materials, Duke University Durham NC 27708 USA.

Pedro Baptista de Castro (PB)

National Institute for Materials Science 1-2-1 Sengen Tsukuba Ibaraki 305-0047 Japan.

Johan Carlsson (J)

Dassault Systèmes Germany GmbH Am Kabellager 11-13 51063 Cologne Germany.

Tiago F T Cerqueira (TFT)

CFisUC, Department of Physics, University of Coimbra Rua Larga 3004-516 Coimbra Portugal.

Simon Divilov (S)

Department of Mechanical Engineering and Materials Science, Duke University Durham NC 27708 USA.
Center for Extreme Materials, Duke University Durham NC 27708 USA.

Hamidreza Hajiyani (H)

Dassault Systèmes Germany GmbH Am Kabellager 11-13 51063 Cologne Germany.

Felix Hanke (F)

Dassault Systèmes 22 Science Park CB4 0FJ UK.

Kevin Jose (K)

Theory of Condensed Matter, Cavendish Laboratory Cambridge UK.

Corey Oses (C)

Department of Materials Science and Engineering, Johns Hopkins University Baltimore MD 21218 USA.

Janosh Riebesell (J)

Theory of Condensed Matter, Cavendish Laboratory Cambridge UK.
Lawrence Berkeley National Lab Berkeley CA USA.

Jonathan Schmidt (J)

Materials Theory, ETH Zürich Wolfgang-Pauli-Strasse 27 8093 Zurich Switzerland.

Donald Winston (D)

Polyneme LLC New York NY 10038 USA.

Christen Xie (C)

Department of NanoEngineering, University of California, San Diego 9500 Gilman Drive, La Jolla California 92093-0448 USA.

Xiaoyu Yang (X)

Computer Network Information Center, Chinese Academy of Sciences Beijing 100083 China.
University of Chinese Academy of Sciences Beijing 101408 China.
Beijing MaiGao MatCloud Technology Co. Ltd Beijing 100149 China.

Sara Bonella (S)

Centre Européen de Calcul Atomique et Moléculaire (CECAM), École Polytechnique Fédérale de Lausanne Avenue de Forel 3 1015 Lausanne Switzerland.

Silvana Botti (S)

Research Center Future Energy Materials and Systems of the University Alliance Ruhr and Interdisciplinary Centre for Advanced Materials Simulation, Ruhr University Bochum, Universitätsstraße 150 D-44801 Bochum Germany.

Stefano Curtarolo (S)

Department of Mechanical Engineering and Materials Science, Duke University Durham NC 27708 USA.
Center for Extreme Materials, Duke University Durham NC 27708 USA.

Claudia Draxl (C)

Humboldt-Universität zu Berlin, Institut für Physik and IRIS Adlershof 12489 Berlin Germany.

Luis Edmundo Fuentes Cobas (LE)

Centro de Investigación en Materiales Avanzados, S.C. (CIMAV) Av. Miguel de Cervantes 120, Complejo Industrial Chihuahua 31136 Chihuahua Chih. Mexico.

Adam Hospital (A)

Institute for Research in Biomedicine (IRB Barcelona) Baldiri i Reixac 10-12 08028 Barcelona Spain.

Zi-Kui Liu (ZK)

Department of Materials Science and Engineering, The Pennsylvania State University, University Park PA 16802 USA.

Miguel A L Marques (MAL)

Research Center Future Energy Materials and Systems of the University Alliance Ruhr and Interdisciplinary Centre for Advanced Materials Simulation, Ruhr University Bochum, Universitätsstraße 150 D-44801 Bochum Germany.

Nicola Marzari (N)

Theory and Simulation of Materials (THEOS), and National Centre for Computational Design and Discovery of Novel Materials (MARVEL), École Polytechnique Fédérale de Lausanne 1015 Lausanne Switzerland.
Laboratory for Materials Simulations (LMS), Paul Scherrer Institute (PSI) 5232 Villigen PSI Switzerland.

Andrew J Morris (AJ)

School of Metallurgy and Materials, University of Birmingham Edgbaston Birmingham B15 2TT UK.

Shyue Ping Ong (SP)

Department of NanoEngineering, University of California, San Diego 9500 Gilman Drive, La Jolla California 92093-0448 USA.

Modesto Orozco (M)

Institute for Research in Biomedicine (IRB Barcelona) Baldiri i Reixac 10-12 08028 Barcelona Spain.

Kristin A Persson (KA)

Lawrence Berkeley National Lab Berkeley CA USA.
Department of Materials Science and Engineering, UC Berkeley Hearst Mining Memorial Building Berkeley 94720 CA USA.

Kristian S Thygesen (KS)

Computational Atomic-Scale Materials Design, Technical University of Denmark Kgs. Lyngby Denmark.

Chris Wolverton (C)

Department of Materials Science and Engineering, Northwestern University Evanston IL 60208 USA.

Markus Scheidgen (M)

Humboldt-Universität zu Berlin, Institut für Physik and IRIS Adlershof 12489 Berlin Germany.

Cormac Toher (C)

Center for Extreme Materials, Duke University Durham NC 27708 USA.
Department of Materials Science and Engineering and Department of Chemistry and Biochemistry, The University of Texas at Dallas Richardson TX 75080 USA.

Gareth J Conduit (GJ)

Theory of Condensed Matter, Cavendish Laboratory Cambridge UK.
Intellegens Ltd French's Rd Cambridge CB4 3NP UK.

Giovanni Pizzi (G)

Theory and Simulation of Materials (THEOS), and National Centre for Computational Design and Discovery of Novel Materials (MARVEL), École Polytechnique Fédérale de Lausanne 1015 Lausanne Switzerland.
Laboratory for Materials Simulations (LMS), Paul Scherrer Institute (PSI) 5232 Villigen PSI Switzerland.

Saulius Gražulis (S)

Institute of Biotechnology, Life Sciences Center, Vilnius University Saulėtekio av. 7 LT-10257 Vilnius Lithuania.
Institute of Computer Science, Faculty of Mathematics and Informatics, Vilnius University Naugarduko g. 24 LT-03225 Vilnius Lithuania.

Gian-Marco Rignanese (GM)

UCLouvain, Institut de la Matière Condensée et des Nanosciences (IMCN) Chemin des Étoiles 8, Louvain-la-Neuve 1348 Belgium gian-marco.rignanese@uclouvain.be.
Matgenix SRL 185 Rue Armand Bury 6534 Gozée Belgium.
School of Materials Science and Engineering, Northwestern Polytechnical University Xi'an Shaanxi 710072 China.

Rickard Armiento (R)

Materials Design and Informatics Unit, Department of Physics, Chemistry and Biology, Linköping University Sweden rickard.armiento@liu.se.

Classifications MeSH