i-PI 3.0: A flexible and efficient framework for advanced atomistic simulations.


Journal

The Journal of chemical physics
ISSN: 1089-7690
Titre abrégé: J Chem Phys
Pays: United States
ID NLM: 0375360

Informations de publication

Date de publication:
14 Aug 2024
Historique:
received: 26 04 2024
accepted: 11 07 2024
medline: 14 8 2024
pubmed: 14 8 2024
entrez: 14 8 2024
Statut: ppublish

Résumé

Atomic-scale simulations have progressed tremendously over the past decade, largely thanks to the availability of machine-learning interatomic potentials. These potentials combine the accuracy of electronic structure calculations with the ability to reach extensive length and time scales. The i-PI package facilitates integrating the latest developments in this field with advanced modeling techniques thanks to a modular software architecture based on inter-process communication through a socket interface. The choice of Python for implementation facilitates rapid prototyping but can add computational overhead. In this new release, we carefully benchmarked and optimized i-PI for several common simulation scenarios, making such overhead negligible when i-PI is used to model systems up to tens of thousands of atoms using widely adopted machine learning interatomic potentials, such as Behler-Parinello, DeePMD, and MACE neural networks. We also present the implementation of several new features, including an efficient algorithm to model bosonic and fermionic exchange, a framework for uncertainty quantification to be used in conjunction with machine-learning potentials, a communication infrastructure that allows for deeper integration with electronic-driven simulations, and an approach to simulate coupled photon-nuclear dynamics in optical or plasmonic cavities.

Identifiants

pubmed: 39140447
pii: 3308034
doi: 10.1063/5.0215869
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2024 Author(s). All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

Auteurs

Yair Litman (Y)

Y. Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom.

Venkat Kapil (V)

Y. Hamied Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom.
Department of Physics and Astronomy, University College London, 17-19 Gordon St, London WC1H 0AH, United Kingdom.
Thomas Young Centre and London Centre for Nanotechnology, 19 Gordon St, London WC1H 0AH, United Kingdom.

Yotam M Y Feldman (YMY)

School of Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel.

Davide Tisi (D)

Laboratory of Computational Science and Modeling, Institut des Matériaux, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.

Tomislav Begušić (T)

Div. of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA.

Karen Fidanyan (K)

MPI for the Structure and Dynamics of Matter, Hamburg, Germany.

Guillaume Fraux (G)

Laboratory of Computational Science and Modeling, Institut des Matériaux, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.

Jacob Higer (J)

School of Physics, Tel Aviv University, Tel Aviv 6997801, Israel.

Matthias Kellner (M)

Laboratory of Computational Science and Modeling, Institut des Matériaux, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.

Tao E Li (TE)

Department of Physics and Astronomy, University of Delaware, Newark, Delaware 19716, USA.

Eszter S Pós (ES)

MPI for the Structure and Dynamics of Matter, Hamburg, Germany.

Elia Stocco (E)

MPI for the Structure and Dynamics of Matter, Hamburg, Germany.

George Trenins (G)

MPI for the Structure and Dynamics of Matter, Hamburg, Germany.

Barak Hirshberg (B)

School of Chemistry, Tel Aviv University, Tel Aviv 6997801, Israel.

Mariana Rossi (M)

MPI for the Structure and Dynamics of Matter, Hamburg, Germany.

Michele Ceriotti (M)

Laboratory of Computational Science and Modeling, Institut des Matériaux, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.

Classifications MeSH