Universal cold RNA phase transitions.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
20 Aug 2024
Historique:
medline: 16 8 2024
pubmed: 16 8 2024
entrez: 16 8 2024
Statut: ppublish

Résumé

RNA's diversity of structures and functions impacts all life forms since primordia. We use calorimetric force spectroscopy to investigate RNA folding landscapes in previously unexplored low-temperature conditions. We find that Watson-Crick RNA hairpins, the most basic secondary structure elements, undergo a glass-like transition below [Formula: see text]C where the heat capacity abruptly changes and the RNA folds into a diversity of misfolded structures. We hypothesize that an altered RNA biochemistry, determined by sequence-independent ribose-water interactions, outweighs sequence-dependent base pairing. The ubiquitous ribose-water interactions lead to universal RNA phase transitions below

Identifiants

pubmed: 39150781
doi: 10.1073/pnas.2408313121
doi:

Substances chimiques

RNA 63231-63-0
Water 059QF0KO0R

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2408313121

Subventions

Organisme : Fondazione Angelo Della Riccia (Angelo Della Riccia Foundation)
ID : 2021-2022
Organisme : Ministerio de Ciencia, Innovación y Universidades (MCIU)
ID : PID2022-139913NB-I00
Organisme : Departament d'Innovació, Universitats i Empresa, Generalitat de Catalunya (DIUE)
ID : Icrea Academia 2018

Déclaration de conflit d'intérêts

Competing interests statement:The authors declare no competing interest.

Auteurs

Paolo Rissone (P)

Small Biosystems Lab, Condensed Matter Physics Department, Universitat de Barcelona, Barcelona 08028, Spain.

Aurélien Severino (A)

Small Biosystems Lab, Condensed Matter Physics Department, Universitat de Barcelona, Barcelona 08028, Spain.

Isabel Pastor (I)

Small Biosystems Lab, Condensed Matter Physics Department, Universitat de Barcelona, Barcelona 08028, Spain.

Felix Ritort (F)

Small Biosystems Lab, Condensed Matter Physics Department, Universitat de Barcelona, Barcelona 08028, Spain.
Institut de Nanociència i Nanotecnologia, Universitat de Barcelona, Barcelona 08028, Spain.

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Classifications MeSH