A Database Tool Integrating Genomic and Pharmacologic Data from Adrenocortical Carcinoma (ACC) Cell Lines, PDX, and Patient Samples.


Journal

Cancer research communications
ISSN: 2767-9764
Titre abrégé: Cancer Res Commun
Pays: United States
ID NLM: 9918281580506676

Informations de publication

Date de publication:
20 Aug 2024
Historique:
accepted: 14 08 2024
received: 14 02 2024
revised: 07 06 2024
medline: 20 8 2024
pubmed: 20 8 2024
entrez: 20 8 2024
Statut: aheadofprint

Résumé

Adrenocortical carcinoma (ACC) is a rare and highly heterogeneous disease with a notably poor prognosis due to significant challenges in diagnosis and treatment. Emphasising on the importance of precision medicine, there is an increasing need for comprehensive genomic resources alongside well-developed experimental models to devise personalized therapeutic strategies. We present ACC_CellMinerCDB, a substantive genomic and drug sensitivity database (available at https://discover.nci.nih.gov/acc_cellminercdb) comprising ACC cell lines, patient-derived xenografts, surgical samples, combined with responses to over 2,400 drugs examined by NCI and NCATS. This database exposes shared genomic pathways among ACC cell lines and surgical samples, thus authenticating the cell lines as research models. It also allows exploration of pertinent treatment markers such as MDR-1, SOAT1, MGMT, MMR and SLFN11, and introduces the potential to repurpose agents like temozolomide for ACC therapy. ACC_CellMinerCDB provides the foundation for exploring larger preclinical ACC models.

Identifiants

pubmed: 39162009
pii: 747000
doi: 10.1158/2767-9764.CRC-24-0100
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Yashuhiro Arakawa (Y)

National Cancer Institute, Bethesda, MD, United States.

Fathi Elloumi (F)

National Institutes of Health, Bethesda, MD, United States.

Sudhir Varma (S)

National Cancer Institute, Bethesda, Maryland, United States.

Prashant Khandagale (P)

National Cancer Institute, Bethesda, MD, United States.

Ukhyun Jo (U)

NCI, Bethesda, Maryland, United States.

Suresh Kumar (S)

National Cancer Institute, Bethesda, MD, United States.

Nitin Roper (N)

National Cancer Institute, Bethesda, Maryland, United States.

William C Reinhold (WC)

National Cancer Institute, Bethesda, MD, United States.

Robert W Robey (RW)

National Institutes of Health, Bethesda, MD, United States.

Naoko Takebe (N)

National Cancer Institute, Bethesda, Maryland, United States.

Michael M Gottesman (MM)

National Cancer Institute, Bethesda, MD, United States.

Craig J Thomas (CJ)

National Institutes of Health, Rockville, md, United States.

Valentina Boeva (V)

ETH Zurich, Zürich, Switzerland.

Andrea Abate (A)

University of Brescia, Brescia, Italy.

Sandra Sigala (S)

University of Brescia, Brescia, Brescia, Italy.

Constanze Hantel (C)

Klinik für Endokrinologie, Diabetologie und Klinische Ernährung, Schlieren, Switzerland.

Isabel Weigand (I)

LMU Klinikum, Munich, Bavaria, Germany.

Margaret E Wierman (ME)

University of Colorado Anschutz Medical Campus and esearch Service, Rocky Mountain Regional Veterans Affairs Medical Center, Aurora, Colorado, United States.

Katja Kiseljak-Vassiliades (K)

University of Colorado Anschutz Medical Campus, Aurora, CO, United States.

Jaydira Del Rivero (J)

National Cancer Institute, Bethesda, MD, United States.

Yves Pommier (Y)

National Cancer Institute, Bethesda, MD, United States.

Classifications MeSH