Next-generation sequencing-based evaluation of the actionable landscape of genomic alterations in solid tumors: the "MOZART" prospective observational study.

ESCAT clinical actionability metastatic molecular profiling next-generation sequencing solid tumors

Journal

The oncologist
ISSN: 1549-490X
Titre abrégé: Oncologist
Pays: England
ID NLM: 9607837

Informations de publication

Date de publication:
23 Aug 2024
Historique:
received: 18 02 2024
accepted: 10 07 2024
medline: 23 8 2024
pubmed: 23 8 2024
entrez: 23 8 2024
Statut: aheadofprint

Résumé

The identification of the most appropriate targeted therapies for advanced cancers is challenging. We performed a molecular profiling of metastatic solid tumors utilizing a comprehensive next-generation sequencing (NGS) assay to determine genomic alterations' type, frequency, actionability, and potential correlations with PD-L1 expression. A total of 304 adult patients with heavily pretreated metastatic cancers treated between January 2019 and March 2021 were recruited. The CLIA-/UKAS-accredit Oncofocus assay targeting 505 genes was used on newly obtained or archived biopsies. Chi-square, Kruskal-Wallis, and Wilcoxon rank-sum tests were used where appropriate. Results were significant for P < .05. A total of 237 tumors (78%) harbored potentially actionable genomic alterations. Tumors were positive for PD-L1 in 68.9% of cases. The median number of mutant genes/tumor was 2.0 (IQR: 1.0-3.0). Only 34.5% were actionable ESCAT Tier I-II with different prevalence according to cancer type. The DNA damage repair (14%), the PI3K/AKT/mTOR (14%), and the RAS/RAF/MAPK (12%) pathways were the most frequently altered. No association was found among PD-L1, ESCAT, age, sex, and tumor mutational status. Overall, 62 patients underwent targeted treatment, with 37.1% obtaining objective responses. The same molecular-driven treatment for different cancer types could be associated with opposite clinical outcomes. We highlight the clinical value of molecular profiling in metastatic solid tumors using comprehensive NGS-based panels to improve treatment algorithms in situations of uncertainty and facilitate clinical trial recruitment. However, interpreting genomic alterations in a tumor type-specific manner is critical.

Sections du résumé

BACKGROUND BACKGROUND
The identification of the most appropriate targeted therapies for advanced cancers is challenging. We performed a molecular profiling of metastatic solid tumors utilizing a comprehensive next-generation sequencing (NGS) assay to determine genomic alterations' type, frequency, actionability, and potential correlations with PD-L1 expression.
METHODS METHODS
A total of 304 adult patients with heavily pretreated metastatic cancers treated between January 2019 and March 2021 were recruited. The CLIA-/UKAS-accredit Oncofocus assay targeting 505 genes was used on newly obtained or archived biopsies. Chi-square, Kruskal-Wallis, and Wilcoxon rank-sum tests were used where appropriate. Results were significant for P < .05.
RESULTS RESULTS
A total of 237 tumors (78%) harbored potentially actionable genomic alterations. Tumors were positive for PD-L1 in 68.9% of cases. The median number of mutant genes/tumor was 2.0 (IQR: 1.0-3.0). Only 34.5% were actionable ESCAT Tier I-II with different prevalence according to cancer type. The DNA damage repair (14%), the PI3K/AKT/mTOR (14%), and the RAS/RAF/MAPK (12%) pathways were the most frequently altered. No association was found among PD-L1, ESCAT, age, sex, and tumor mutational status. Overall, 62 patients underwent targeted treatment, with 37.1% obtaining objective responses. The same molecular-driven treatment for different cancer types could be associated with opposite clinical outcomes.
CONCLUSIONS CONCLUSIONS
We highlight the clinical value of molecular profiling in metastatic solid tumors using comprehensive NGS-based panels to improve treatment algorithms in situations of uncertainty and facilitate clinical trial recruitment. However, interpreting genomic alterations in a tumor type-specific manner is critical.

Identifiants

pubmed: 39177668
pii: 7739848
doi: 10.1093/oncolo/oyae206
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : University of Trieste

Informations de copyright

© The Author(s) 2024. Published by Oxford University Press.

Auteurs

Francesco Schettini (F)

Translational Genomics and Targeted Therapies in Solid Tumors Group, August Pi i Sunyer Biomedical Research Institute (IDIBAPS), 08036 Barcelona, Spain.
Medical Oncology Department, Hospital Clinic of Barcelona, 08036 Barcelona, Spain.
Faculty of Medicine and Health Sciences, University of Barcelona, 08036 Barcelona, Spain.

Marianna Sirico (M)

Department of Medical Oncology, IRCCS Istituto Romagnolo per lo Studio dei Tumori (IRST) "Dino Amadori," 47014, Meldola, Italy.

Marco Loddo (M)

Oncologica UK Ltd, Cambridge CB10 1XL, United Kingdom.

Gareth H Williams (GH)

Oncologica UK Ltd, Cambridge CB10 1XL, United Kingdom.

Keeda-Marie Hardisty (KM)

Oncologica UK Ltd, Cambridge CB10 1XL, United Kingdom.

Paul Scorer (P)

Oncologica UK Ltd, Cambridge CB10 1XL, United Kingdom.

Robert Thatcher (R)

Oncologica UK Ltd, Cambridge CB10 1XL, United Kingdom.

Pablo Rivera (P)

Medical Oncology Department, Hospital Clinic of Barcelona, 08036 Barcelona, Spain.

Manuela Milani (M)

Department of Medical, Surgical and Health Sciences, University of Trieste, 34147, Trieste, Italy.

Carla Strina (C)

Department of Medical, Surgical and Health Sciences, University of Trieste, 34147, Trieste, Italy.

Giuseppina Ferrero (G)

Multidisciplinary Unit of Breast Pathology and Translational Research, Cremona Hospital, 26100, Cremona, Italy.

Marco Ungari (M)

Multidisciplinary Unit of Breast Pathology and Translational Research, Cremona Hospital, 26100, Cremona, Italy.

Cristina Bottin (C)

Department of Medical, Surgical and Health Sciences, University of Trieste, 34147, Trieste, Italy.

Fabrizio Zanconati (F)

Department of Medical, Surgical and Health Sciences, University of Trieste, 34147, Trieste, Italy.

Nicolò de Manzini (N)

Department of Medical, Surgical and Health Sciences, University of Trieste, 34147, Trieste, Italy.

Sergio Aguggini (S)

Multidisciplinary Unit of Breast Pathology and Translational Research, Cremona Hospital, 26100, Cremona, Italy.

Richard Tancredi (R)

Multidisciplinary Unit of Breast Pathology and Translational Research, Cremona Hospital, 26100, Cremona, Italy.

Elena Fiorio (E)

Section of Oncology, Department of Medicine, University of Verona School of Medicine and Verona University Hospital Trust, 37134, Verona, Italy.

Antonio Fioravanti (A)

Pathology Unit, ASST Cremona, 26100, Cremona, Italy.

Maurizio Scaltriti (M)

Neurosurgery Unit, ASST Cremona, 26100, Cremona, Italy.
AstraZeneca, Gaithersburg, MD 20876, United States.

Daniele Generali (D)

Department of Medical, Surgical and Health Sciences, University of Trieste, 34147, Trieste, Italy.
Multidisciplinary Unit of Breast Pathology and Translational Research, Cremona Hospital, 26100, Cremona, Italy.

Classifications MeSH