Structure of a truncated human GlcNAc-1-phosphotransferase variant reveals the basis for its hyperactivity.


Journal

The Journal of biological chemistry
ISSN: 1083-351X
Titre abrégé: J Biol Chem
Pays: United States
ID NLM: 2985121R

Informations de publication

Date de publication:
21 Aug 2024
Historique:
received: 02 05 2024
revised: 30 07 2024
accepted: 08 08 2024
medline: 24 8 2024
pubmed: 24 8 2024
entrez: 23 8 2024
Statut: aheadofprint

Résumé

Mutations that cause loss of function of GlcNAc-1-phosphotransferase (PTase) lead to the lysosomal storage disorder mucolipidosis II. PTase is the key enzyme of the mannose 6-phosphate (M6P) targeting system that is responsible for tagging lysosomal hydrolases with the M6P moiety for their delivery to the lysosome. We had previously generated a truncated hyperactive form of PTase termed S1S3 which was shown to notably increase the phosphorylation level of secreted lysosomal enzymes and enhance their uptake by cells. Here, we report the 3.4 Å cryo-EM structure of soluble S1S3 lacking both transmembrane domains and cytosolic tails. The structure reveals a high degree of conservation of the catalytic core to full-length PTase. In this dimeric structure, the EF hand of one protomer is observed interacting with the conserved region 4 of the other. In addition, we present a high-quality EM 3D map of the UDP-GlcNAc bound form of the full-length soluble protein showing the key molecular interactions between the nucleotide sugar donor and side chain amino acids of the protein. Finally, although the domain organization of S1S3 is very similar to that of the Drosophila melanogaster (fruit fly) PTase homolog, we establish that the latter does not act on lysosomal hydrolases.

Identifiants

pubmed: 39178950
pii: S0021-9258(24)02207-5
doi: 10.1016/j.jbc.2024.107706
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

107706

Informations de copyright

Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.

Auteurs

Hua Li (H)

Department of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA.

Balraj Doray (B)

Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.

Benjamin C Jennings (BC)

Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.

Wang-Sik Lee (WS)

Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.

Lin Liu (L)

Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.

Stuart Kornfeld (S)

Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA. Electronic address: skornfel@wustl.edu.

Huilin Li (H)

Department of Structural Biology, Van Andel Institute, Grand Rapids, MI, USA. Electronic address: huilin.li@vai.org.

Classifications MeSH