Invasive aspergillosis due to cryptic Aspergillus species: A prospective study from a single centre in India.


Journal

Indian journal of medical microbiology
ISSN: 1998-3646
Titre abrégé: Indian J Med Microbiol
Pays: United States
ID NLM: 8700903

Informations de publication

Date de publication:
23 Aug 2024
Historique:
received: 30 06 2024
revised: 18 08 2024
accepted: 20 08 2024
pubmed: 24 8 2024
medline: 24 8 2024
entrez: 23 8 2024
Statut: aheadofprint

Résumé

& objective: The existence of visually identical cryptic Aspergillus species that can be distinguished only by molecular techniques is becoming more widely acknowledged. For the majority of antifungal drugs, these are known to exhibit a greater minimal inhibitory concentration in vitro. For the purpose of receiving the proper care, it is crucial to identify these species at right time. Our aim in this work is to identify and describe the Aspergillus species that are cryptic from all of the clinical samples. Routine samples from inpatients and outpatients received in department of Microbiology, All India Institute of Medical Sciences, New Delhi, showing growth of Aspergillus species were included in this study. Phenotypic and Matrix Assisted Laser Desorption Ionisation - Time of Flight identified isolates were analysed for cryptic species, by PCR and ITS/ß - tubulin sequencing. In accordance with CLSI recommendations, antifungal susceptibility testing was conducted using micro broth dilution. Of the 94 isolates, 54 A. fumigatus, 34 A. flavus, 3 A. nidulans, 2 A. terreus, and 1 A. niger were morphologically identified. MALDI-TOF misidentified 2 A. nidulans isolates and 1 A, stellatus isolate. The ß - tubulin sequence analysis revealed that 2 isolates (2.08 %) were cryptic, one was A. stellatus and another one was A. tubingensis.

Sections du résumé

BACKGROUND BACKGROUND
& objective: The existence of visually identical cryptic Aspergillus species that can be distinguished only by molecular techniques is becoming more widely acknowledged. For the majority of antifungal drugs, these are known to exhibit a greater minimal inhibitory concentration in vitro. For the purpose of receiving the proper care, it is crucial to identify these species at right time. Our aim in this work is to identify and describe the Aspergillus species that are cryptic from all of the clinical samples.
METHODS METHODS
Routine samples from inpatients and outpatients received in department of Microbiology, All India Institute of Medical Sciences, New Delhi, showing growth of Aspergillus species were included in this study. Phenotypic and Matrix Assisted Laser Desorption Ionisation - Time of Flight identified isolates were analysed for cryptic species, by PCR and ITS/ß - tubulin sequencing. In accordance with CLSI recommendations, antifungal susceptibility testing was conducted using micro broth dilution.
RESULTS RESULTS
Of the 94 isolates, 54 A. fumigatus, 34 A. flavus, 3 A. nidulans, 2 A. terreus, and 1 A. niger were morphologically identified. MALDI-TOF misidentified 2 A. nidulans isolates and 1 A, stellatus isolate. The ß - tubulin sequence analysis revealed that 2 isolates (2.08 %) were cryptic, one was A. stellatus and another one was A. tubingensis.

Identifiants

pubmed: 39178991
pii: S0255-0857(24)00183-X
doi: 10.1016/j.ijmmb.2024.100708
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

100708

Informations de copyright

Copyright © 2024 Indian Association of Medical Microbiologists. Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

R Sruti Janani (RS)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: srutijanani19@gmail.com.

Immaculata Xess (I)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: immaxess@gmail.com.

Bimal Kumar Das (BK)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: Tezpur.bimal@gmail.com.

Saumya Cs (S)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: saumyacs@gmail.com.

Tamanna Bordoloi (T)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: tamannabordoloi@gmail.com.

Mragnayani Pandey (M)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: miggipandey@gmail.com.

Jaweed Ahmed (J)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: javidamd112@gmail.com.

Gagandeep Singh (G)

All India Institute of Medical Sciences, New Delhi, India. Electronic address: drgagandeep@gmail.com.

Classifications MeSH