Solvent organization in the ultrahigh-resolution crystal structure of crambin at room temperature.
crambin
dynamic disorder
independent atom model
radiation damage
solvent modeling
static disorder
sub-atomic resolution
water circuits
Journal
IUCrJ
ISSN: 2052-2525
Titre abrégé: IUCrJ
Pays: England
ID NLM: 101623101
Informations de publication
Date de publication:
01 Sep 2024
01 Sep 2024
Historique:
medline:
27
8
2024
pubmed:
27
8
2024
entrez:
27
8
2024
Statut:
aheadofprint
Résumé
Ultrahigh-resolution structures provide unprecedented details about protein dynamics, hydrogen bonding and solvent networks. The reported 0.70 Å, room-temperature crystal structure of crambin is the highest-resolution ambient-temperature structure of a protein achieved to date. Sufficient data were collected to enable unrestrained refinement of the protein and associated solvent networks using SHELXL. Dynamic solvent networks resulting from alternative side-chain conformations and shifts in water positions are revealed, demonstrating that polypeptide flexibility and formation of clathrate-type structures at hydrophobic surfaces are the key features endowing crambin crystals with extraordinary diffraction power.
Identifiants
pubmed: 39190507
pii: S2052252524007784
doi: 10.1107/S2052252524007784
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : U.S. Department of Energy, Office of Science
ID : DE-AC02-06CH11357
Organisme : NIH HHS
ID : R35GM145365
Pays : United States
Informations de copyright
open access.