Attractive acceptor-acceptor interactions in self-complementary quadruple hydrogen bonds for molecular self-assembly.


Journal

Physical chemistry chemical physics : PCCP
ISSN: 1463-9084
Titre abrégé: Phys Chem Chem Phys
Pays: England
ID NLM: 100888160

Informations de publication

Date de publication:
12 Sep 2024
Historique:
medline: 12 9 2024
pubmed: 12 9 2024
entrez: 12 9 2024
Statut: aheadofprint

Résumé

Molecular self-assembly provides the means for creating large supramolecular structures, extending beyond the capability of standard chemical synthesis. To harness the power of self-assembly, it is necessary to understand its driving forces. A potent method is to exploit self-complementary hydrogen bonding, where a molecule interacts with its own copy by suitable positions of hydrogen-bond donor (D) and acceptor (A) groups. With four hydrogen bonds, there are two possible self complementary patterns: the DDAA/AADD and the DADA/ADAD motifs. Of these, the DDAA pattern is usually more stable. The traditional explanation assumes that the secondary interactions between equal groups, that is, between donors (D⋯D) or acceptors (A⋯A), are repulsive. DDAA arrays would then have two, and DADA arrays six repulsive interactions. Here, using high-end quantum chemical analysis, we show that contrary to the traditional explanation, the secondary A⋯A interactions are, in fact, attractive. We revise the model of secondary interactions accordingly.

Identifiants

pubmed: 39264175
doi: 10.1039/d4cp02361g
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Usman Ahmed (U)

Department of Chemistry, Faculty of Science, University of Helsinki, P. O. Box 55 (A. I. Virtasen aukio 1), FI-00014, Helsinki, Finland. Usman.Ahmed@helsinki.fi.

Christopher D Daub (CD)

Department of Chemistry, Faculty of Science, University of Helsinki, P. O. Box 55 (A. I. Virtasen aukio 1), FI-00014, Helsinki, Finland. Usman.Ahmed@helsinki.fi.

Dage Sundholm (D)

Department of Chemistry, Faculty of Science, University of Helsinki, P. O. Box 55 (A. I. Virtasen aukio 1), FI-00014, Helsinki, Finland. Usman.Ahmed@helsinki.fi.

Mikael P Johansson (MP)

CSC-IT Center for Science Ltd, P.O. Box 405, FI-02101 Espoo, Finland. Mikael.Johansson@csc.fi.

Classifications MeSH