Novel chiral phthalimides: Antimicrobial evaluation and docking study against Acinetobacter baumannii's OmpA protein.

Acinetobacter baumannii Antibacterial activity Chiral phthalimides MD simulation Molecular docking Outer membrane protein A (OmpA)

Journal

Computers in biology and medicine
ISSN: 1879-0534
Titre abrégé: Comput Biol Med
Pays: United States
ID NLM: 1250250

Informations de publication

Date de publication:
11 Sep 2024
Historique:
received: 08 04 2024
revised: 29 08 2024
accepted: 31 08 2024
medline: 13 9 2024
pubmed: 13 9 2024
entrez: 12 9 2024
Statut: aheadofprint

Résumé

Antibiotics have been a vital component in the fight against microbial diseases for over 75 years, saving countless lives. However, the global rise of multi-drug-resistance (MDR) bacterial infections is pushing us closer to a post-antibiotic era where common infections may once again become lethal. To combat MDR Acinetobacter baumannii, we investigated chiral phthalimides and used molecular docking to identify potential targets. Outer membrane protein A (OmpA) is crucial for A. baumannii resistant to antibiotics, making it a pathogen of great concern due to its high mortality rate and limited treatment options. In this study, we evaluated three distinct compounds against the OmpA protein: FIA (2-(1,3-dioxoindolin-2yl)-3-phenylpropanoic acid), FIC (2-(1,3-dioxoindolin-2yl)-4-(methylthio) butanoic acid), and FII (3-(1,3-dioxoindolin-2yl)-3-phenylpropanoic acid). Molecular docking results showed that these three compounds exhibited strong interactions with the OmpA protein. Molecular dynamics (MD) simulation analysis further confirmed the stability and binding efficacy of these compounds with OmpA. Their antimicrobial activities were assessed using the agar well diffusion method, revealing that FIA had an optimal zone of inhibition of 24 mm. Additionally, the minimum inhibitory concentrations (MIC) of these compounds were determined, demonstrating their bactericidal properties against A. baumannii, with MICs of 11 μg/μL for FIA, 46 μg/μL for FIC, and 375 μg/μL for FII. In vitro cytotoxicity data indicated that none of the three compounds were hemolytic when exposed to human red blood cells. This finding is particularly significant as it highlights the superior efficacy of FIA against A. baumannii compared to the other compounds. With thorough pharmacokinetic validations, these chiral phthalimides are promising alternative therapeutic options for treating infections caused by A. baumannii, offering new hope in the face of rising antibiotic resistance.

Identifiants

pubmed: 39265475
pii: S0010-4825(24)01184-3
doi: 10.1016/j.compbiomed.2024.109099
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

109099

Informations de copyright

Copyright © 2024 Elsevier Ltd. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Rimsha Abid (R)

Institute of Pathology and Diagnostic Medicine, Department of Microbiology, Khyber Medical University, Peshawar, Khyber Pakhtunkhwa, Pakistan. Electronic address: rimshaabid.ipdm@kmu.ed.pk.

Momin Khan (M)

Institute of Pathology and Diagnostic Medicine, Department of Microbiology, Khyber Medical University, Peshawar, Khyber Pakhtunkhwa, Pakistan. Electronic address: mominkhan.ibms@kmu.edu.pk.

Nayyer Siddique (N)

Institute of Pathology and Diagnostic Medicine, Department of Microbiology, Khyber Medical University, Peshawar, Khyber Pakhtunkhwa, Pakistan. Electronic address: nayyer.ibms@kmu.edu.pk.

Sher Wali Khan (SW)

Department of Chemistry, Rawalpindi Women University, Rawalpindi, 46300, Pakistan. Electronic address: sherwalikhan@f.rwu.edu.pk.

Rahat Ullah Khan (RU)

CAS Key Laboratory of Pathogen Microbiology and Immunology, Institute of Microbiology, Center for Influenza Research and Early-warning (CASCIRE), CAS-TWAS Center of Excellence for Emerging Infectious Diseases (CEEID, Chinese Academy of Sciences, 100101, Beijing, China; College of Life Science, University of Chinese Academy of Sciences, Beijing, 101408, China. Electronic address: rahatullahkhan@gu.edu.pk.

Muhammad Zahoor (M)

Department of Biochemistry, University of Malakand, Chakdara, 18800, Pakistan. Electronic address: mohammadzahoorus@yahoo.com.

Riaz Ullah (R)

Medicinal Aromatic and Poisonous Plants Research Center, Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, 11451, Saudi Arabia. Electronic address: rullah@ksa.edu.sa.

Amal Alotaibi (A)

Department of Basic Science, College of Medicine, Princess Nourah bint Abdulrahman University, Riyadh, 11671, Saudi Arabia. Electronic address: amaalotaibi@pnu.edu.sa.

Classifications MeSH