Inverse modeling of time-delayed interactions via the dynamic-entropy formalism.


Journal

Physical review. E
ISSN: 2470-0053
Titre abrégé: Phys Rev E
Pays: United States
ID NLM: 101676019

Informations de publication

Date de publication:
Aug 2024
Historique:
received: 03 09 2023
accepted: 15 07 2024
medline: 19 9 2024
pubmed: 19 9 2024
entrez: 19 9 2024
Statut: ppublish

Résumé

Although instantaneous interactions are unphysical, a large variety of maximum entropy statistical inference methods match the model-inferred and the empirically measured equal-time correlation functions. Focusing on collective motion of active units, this constraint is reasonable when the interaction timescale is much faster than that of the interacting units, as in starling flocks, yet it fails in a number of counterexamples, as in leukocyte coordination (where signaling proteins diffuse among two cells). Here, we relax this assumption and develop a path integral approach to maximum-entropy framework, which includes delay in signaling. Our method is able to infer the strength of couplings and fields, but also the time required by the couplings to completely transfer information among the units. We demonstrate the validity of our approach providing excellent results on synthetic datasets of non-Markovian trajectories generated by the Heisenberg-Kuramoto and Vicsek models equipped with delayed interactions. As a proof of concept, we also apply the method to experiments on dendritic migration, where matching equal-time correlations results in a significant information loss.

Identifiants

pubmed: 39295007
doi: 10.1103/PhysRevE.110.024301
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

024301

Auteurs

Elena Agliari (E)

Dipartimento di Matematica, <a href="https://ror.org/02be6w209">Sapienza Università di Roma</a>, Roma, Italy.

Francesco Alemanno (F)

Dipartimento di Matematica e Fisica, <a href="https://ror.org/03fc1k060">Università del Salento</a>, Lecce, Italy.

Adriano Barra (A)

Dipartimento di Scienze di Base e Applicate per l'Ingegneria, <a href="https://ror.org/02be6w209">Sapienza Università di Roma</a>, Roma, Italy.
<a href="https://ror.org/00qrf6g60">Istituto Nazionale di Fisica Nucleare</a>, Sezione di Lecce, Italy.

Michele Castellana (M)

Laboratoire PhysicoChimie, <a href="https://ror.org/04t0gwh46">Institut Curie</a>, CNRS UMR168, Paris, France.

Daniele Lotito (D)

Dipartimento di Informatica, <a href="https://ror.org/03ad39j10">Università di Pisa</a>, Pisa, Italy.

Matthieu Piel (M)

Laboratoire de Biologie Cellulaire et Cancer, <a href="https://ror.org/04t0gwh46">Institut Curie</a>, CNRS UMR168, Paris, France.

Classifications MeSH