Virtual multi-staining in a single-section view for renal pathology using generative adversarial networks.

Artificial intelligence GAN Renal biopsy Renal pathology Virtual staining

Journal

Computers in biology and medicine
ISSN: 1879-0534
Titre abrégé: Comput Biol Med
Pays: United States
ID NLM: 1250250

Informations de publication

Date de publication:
18 Sep 2024
Historique:
received: 02 03 2024
revised: 17 08 2024
accepted: 09 09 2024
medline: 20 9 2024
pubmed: 20 9 2024
entrez: 19 9 2024
Statut: aheadofprint

Résumé

Sections stained in periodic acid-Schiff (PAS), periodic acid-methenamine silver (PAM), hematoxylin and eosin (H&E), and Masson's trichrome (MT) stain with minimal morphological discordance are helpful for pathological diagnosis in renal biopsy. Here, we propose an artificial intelligence-based re-stainer called PPHM-GAN (PAS, PAM, H&E, and MT-generative adversarial networks) with multi-stain to multi-stain transformation capability. We trained three GAN models on 512 × 512-pixel patches from 26 training cases. The model with the best transformation quality was selected for each pair of stain transformations by human evaluation. Frechet inception distances, peak signal-to-noise ratio, structural similarity index measure, contrast structural similarity, and newly introduced domain shift inception score were calculated as auxiliary quality metrics. We validated the diagnostic utility using 5120 × 5120 patches of ten validation cases for major glomerular and interstitial abnormalities. Transformed stains were sometimes superior to original stains for the recognition of crescent formation, mesangial hypercellularity, glomerular sclerosis, interstitial lesions, or arteriosclerosis. 23 of 24 glomeruli (95.83 %) from 9 additional validation cases transformed to PAM, PAS, or MT facilitated recognition of crescent formation. Stain transformations to PAM (p = 4.0E-11) and transformations from H&E (p = 4.8E-9) most improved crescent formation recognition. PPHM-GAN maximizes information from a given section by providing several stains in a virtual single-section view, and may change the staining and diagnostic strategy.

Identifiants

pubmed: 39298886
pii: S0010-4825(24)01234-4
doi: 10.1016/j.compbiomed.2024.109149
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

109149

Informations de copyright

Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests. Masataka Kawai has patent pending to University of Yamanashi.

Auteurs

Masataka Kawai (M)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan. Electronic address: mkawai@yamanashi.ac.jp.

Toru Odate (T)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan.

Kazunari Kasai (K)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan.

Tomohiro Inoue (T)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan.

Kunio Mochizuki (K)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan.

Naoki Oishi (N)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan.

Tetsuo Kondo (T)

Department of Pathology, University of Yamanashi, Chuo, Yamanashi, Japan.

Classifications MeSH