Investigating the contribution of image time series observations to cauliflower harvest-readiness prediction.

GroupSHAP deep learning explainability feature contribution harvest-readiness

Journal

Frontiers in artificial intelligence
ISSN: 2624-8212
Titre abrégé: Front Artif Intell
Pays: Switzerland
ID NLM: 101770551

Informations de publication

Date de publication:
2024
Historique:
received: 12 04 2024
accepted: 20 08 2024
medline: 3 10 2024
pubmed: 3 10 2024
entrez: 3 10 2024
Statut: epublish

Résumé

Cauliflower cultivation is subject to high-quality control criteria during sales, which underlines the importance of accurate harvest timing. Using time series data for plant phenotyping can provide insights into the dynamic development of cauliflower and allow more accurate predictions of when the crop is ready for harvest than single-time observations. However, data acquisition on a daily or weekly basis is resource-intensive, making selection of acquisition days highly important. We investigate which data acquisition days and development stages positively affect the model accuracy to get insights into prediction-relevant observation days and aid future data acquisition planning. We analyze harvest-readiness using the cauliflower image time series of the GrowliFlower dataset. We use an adjusted ResNet18 classification model, including positional encoding of the data acquisition dates to add implicit information about development. The explainable machine learning approach GroupSHAP analyzes time points' contributions. Time points with the lowest mean absolute contribution are excluded from the time series to determine their effect on model accuracy. Using image time series rather than single time points, we achieve an increase in accuracy of 4%. GroupSHAP allows the selection of time points that positively affect the model accuracy. By using seven selected time points instead of all 11 ones, the accuracy improves by an additional 4%, resulting in an overall accuracy of 89.3%. The selection of time points may therefore lead to a reduction in data collection in the future.

Identifiants

pubmed: 39359647
doi: 10.3389/frai.2024.1416323
pmc: PMC11445755
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1416323

Informations de copyright

Copyright © 2024 Kierdorf, Stomberg, Drees, Rascher and Roscher.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Auteurs

Jana Kierdorf (J)

Remote Sensing Group, Institute of Geodesy and Geoinformation, University of Bonn, Bonn, Germany.

Timo Tjarden Stomberg (TT)

Remote Sensing Group, Institute of Geodesy and Geoinformation, University of Bonn, Bonn, Germany.

Lukas Drees (L)

Remote Sensing Group, Institute of Geodesy and Geoinformation, University of Bonn, Bonn, Germany.

Uwe Rascher (U)

Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany.

Ribana Roscher (R)

Remote Sensing Group, Institute of Geodesy and Geoinformation, University of Bonn, Bonn, Germany.
Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany.

Classifications MeSH