Complete genome sequence of a vampire bat-related rabies virus obtained by metagenomics from a patient with encephalitis of unknown etiology, French Guiana.

French Guiana Illumina bat complete genome diagnosis encephalitis human metagenomics next generation sequencing rabies

Journal

Microbiology resource announcements
ISSN: 2576-098X
Titre abrégé: Microbiol Resour Announc
Pays: United States
ID NLM: 101728794

Informations de publication

Date de publication:
04 Oct 2024
Historique:
medline: 4 10 2024
pubmed: 4 10 2024
entrez: 4 10 2024
Statut: aheadofprint

Résumé

We report the complete genome sequence of a rabies virus obtained by direct metagenomics from the cerebellum of a gold panner who died of unknown encephalitis in French Guiana. Phylogenetic analysis exhibited a close genetic relationship with vampire bat-related isolates, confirming the second case of human rabies identified in this territory.

Identifiants

pubmed: 39365087
doi: 10.1128/mra.00514-24
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e0051424

Auteurs

Véronique Hourdel (V)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Charlotte Balière (C)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Jessica Vanhomwegen (J)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Angela Brisebarre (A)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Quentin Grassin (Q)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Jean-Claude Manuguerra (J-C)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Hatem Kallel (H)

Service de Réanimation Polyvalente, Centre Hospitalier de Cayenne, Cayenne, French Guiana.

Magalie Demar (M)

Laboratoire de Biologie Médicale, Centre Hospitalier de Cayenne, Cayenne, French Guiana.

Laurent Dacheux (L)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Valérie Caro (V)

Institut Pasteur, Université Paris Cité, Laboratory for Urgent Response to Biological Threats (CIBU), Environment and Infectious Risks (ERI) Unit, Paris, France.

Classifications MeSH