A Concise Guide to Essential R Packages for Analyses of DNA, RNA, and Proteins.
Genomics
R package
proteomics
transcriptomics
Journal
Molecules and cells
ISSN: 0219-1032
Titre abrégé: Mol Cells
Pays: United States
ID NLM: 9610936
Informations de publication
Date de publication:
05 Oct 2024
05 Oct 2024
Historique:
received:
06
08
2024
revised:
30
09
2024
accepted:
30
09
2024
medline:
8
10
2024
pubmed:
8
10
2024
entrez:
7
10
2024
Statut:
aheadofprint
Résumé
R is widely regarded as unrivalled by other high-level programming languages for its statistical functions. The popularity of R as a statistical language has led many to overlook its applications outside the statistical realm. In this brief review, we present a list of R packages for supporting projects that entail analyses of DNA, RNA, and proteins. These R packages span the gamut of important molecular techniques, from routine quantitative PCR and Western blotting to high-throughput sequencing and proteomics generating very large datasets. The text-mining power of R can also be harnessed to facilitate literature reviews and predict future research trends and avenues. We encourage researchers to make full use of R in their work, given the versatility of the language, as well as its straightforward syntax which eases the initial learning curve.
Identifiants
pubmed: 39374792
pii: S1016-8478(24)00145-6
doi: 10.1016/j.mocell.2024.100120
pii:
doi:
Types de publication
Letter
Langues
eng
Sous-ensembles de citation
IM
Pagination
100120Informations de copyright
Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.