Classification of psychosis spectrum disorders using graph convolutional networks with structurally constrained functional connectomes.

Deep learning Graph convolutional networks Machine learning Psychotic-like experiences Support vector machines Transdiagnostic sample

Journal

Neural networks : the official journal of the International Neural Network Society
ISSN: 1879-2782
Titre abrégé: Neural Netw
Pays: United States
ID NLM: 8805018

Informations de publication

Date de publication:
30 Sep 2024
Historique:
received: 11 02 2024
revised: 06 09 2024
accepted: 28 09 2024
medline: 10 10 2024
pubmed: 10 10 2024
entrez: 9 10 2024
Statut: aheadofprint

Résumé

This article considers the problem of classifying individuals in a dataset of diverse psychosis spectrum conditions, including persons with subsyndromal psychotic-like experiences (PLEs) and healthy controls. This task is more challenging than the traditional problem of distinguishing patients with a diagnosed disorder from controls using brain network features, since the neurobiological differences between PLE individuals and healthy persons are less pronounced. Further, examining a transdiagnostic sample compared to controls is concordant with contemporary approaches to understanding the full spectrum of neurobiology of psychoses. We consider both support vector machines (SVMs) and graph convolutional networks (GCNs) for classification, with a variety of edge selection methods for processing the inputs. We also employ the MultiVERSE algorithm to generate network embeddings of the functional and structural networks for each subject, which are used as inputs for the SVMs. The best models among SVMs and GCNs yielded accuracies >63%. Investigation of network connectivity between persons with PLE and controls identified a region within the right inferior parietal cortex, called the PGi, as a central region for communication among modules (network hub). Class activation mapping revealed that the PLE group had salient regions in the dorsolateral prefrontal, orbital and polar frontal cortices, and the lateral temporal cortex, whereas the controls did not. Our study demonstrates the potential usefulness of deep learning methods to distinguish persons with subclinical psychosis and diagnosable disorders from controls. In the long term, this could help improve accuracy and reliability of clinical diagnoses, provide neurobiological bases for making diagnoses, and initiate early intervention strategies.

Identifiants

pubmed: 39383678
pii: S0893-6080(24)00695-6
doi: 10.1016/j.neunet.2024.106771
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

106771

Informations de copyright

Copyright © 2024. Published by Elsevier Ltd.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Madison Lewis (M)

Department of Bioengineering, Swanson School of Engineering, University of Pittsburgh, Pittsburgh, PA 15213, United States.

Wenlong Jiang (W)

Department of Statistics, University of Pittsburgh, Pittsburgh, PA 15213, United States.

Nicholas D Theis (ND)

Department of Psychiatry, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, United States.

Joshua Cape (J)

Department of Statistics, University of Wisconsin-Madison, Madison, WI 52706, United States.

Konasale M Prasad (KM)

Department of Bioengineering, Swanson School of Engineering, University of Pittsburgh, Pittsburgh, PA 15213, United States; Department of Psychiatry, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, United States; Veterans Affairs Pittsburgh Healthcare System, Pittsburgh, PA 15240, United States. Electronic address: Kmp8@pitt.edu.

Classifications MeSH