Considering best practice standards for routine whole-genome sequencing for TB care and control.

Mycobacterium tuberculosis cluster analysis computational biology genomics policy making public health tuberculosis

Journal

IJTLD open
ISSN: 3005-7590
Titre abrégé: IJTLD Open
Pays: France
ID NLM: 9918803487706676

Informations de publication

Date de publication:
Oct 2024
Historique:
received: 11 06 2024
accepted: 14 08 2024
medline: 14 10 2024
pubmed: 14 10 2024
entrez: 14 10 2024
Statut: epublish

Résumé

TB is a priority pathogen for the application of whole-genome sequencing (WGS) into routine public health practice. In low-incidence settings, a growing number of services have begun to incorporate routine WGS into standard practice. The increasing availability of real-time genomic information supports a variety of aspects of the public health response, including the detection of drug resistance, monitoring of laboratory and clinical practices, contact tracing investigations and active case finding. Optimal structures and approaches are needed to support the rapid translation of genomic information into practice and to evaluate outcomes and impact. In this consensus paper, we outline the elements needed to systemically incorporate routine WGS into the TB public health response, including the sustainability of services, multidisciplinary team models and monitoring and evaluation frameworks. If integrated in an efficient and thoughtful manner, routine WGS has the potential to significantly improve clinical TB care for individuals and the overall public health response. La TB est un agent pathogène prioritaire pour l'application du séquençage du génome entier (WGS, pour l’anglais «

Autres résumés

Type: Publisher (fre)
La TB est un agent pathogène prioritaire pour l'application du séquençage du génome entier (WGS, pour l’anglais «

Identifiants

pubmed: 39398433
doi: 10.5588/ijtldopen.24.0320
pii: 24-0320
pmc: PMC11467850
doi:

Types de publication

Journal Article

Langues

eng

Pagination

431-436

Informations de copyright

© 2024 The Authors.

Déclaration de conflit d'intérêts

Conflicts of interest: none declared.

Auteurs

J T Denholm (JT)

Victorian Tuberculosis Program, Melbourne, VIC, Australia.
Department of Infectious Diseases, Peter Doherty Institute for Infection and Immunity, University of Melbourne, Parkville, VIC, Australia.

G de Vries (G)

Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, The Netherlands.

R Anthony (R)

Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, The Netherlands.

E Robinson (E)

TB Unit and National Mycobacterial Reference Service, United Kingdom Health Security Agency, London, UK.

M Backx (M)

Department of Microbiology, University Hospital of Wales, Cardiff, UK.

I F Laurenson (IF)

Scottish Mycobacteria Reference Laboratory, Royal Infirmary of Edinburgh, Edinburgh, Scotland, UK.

A L Seagar (AL)

Scottish Mycobacteria Reference Laboratory, Royal Infirmary of Edinburgh, Edinburgh, Scotland, UK.

H Modestil (H)

New York City Department of Health and Mental Hygiene, New York, NY, USA.

L Trieu (L)

New York City Department of Health and Mental Hygiene, New York, NY, USA.

J S Meissner (JS)

New York City Department of Health and Mental Hygiene, New York, NY, USA.

D H L Ng (DHL)

National Tuberculosis Programme, National Centre for Infectious Diseases, Singapore.

J Y Tay (JY)

National Tuberculosis Programme, National Centre for Infectious Diseases, Singapore.

H H Lin (HH)

Institute of Epidemiology and Preventive Medicine, National Taiwan University College of Public Health, Taiwan.

R Lee (R)

Faculty of Medicine and Health Sciences, McGill University, Montreal, QC, Canada.

V Sintchenko (V)

NSW Mycobacterium Reference Laboratory, Institute of Clinical Pathology and Medical Research, NSW Health, Sydney, NSW, Australia.
Sydney Infectious Diseases Institute, The University of Sydney, Sydney, NSW, Australia.

B J Marais (BJ)

Sydney Infectious Diseases Institute, The University of Sydney, Sydney, NSW, Australia.

E J Donnan (EJ)

Sydney Infectious Diseases Institute, The University of Sydney, Sydney, NSW, Australia.
New South Wales Tuberculosis Program, Health Protection New South Wales, Sydney, NSW, Australia.

Classifications MeSH