Metagenomic sequencing of CRISPRs as a new marker to aid in personal identification with low-biomass samples.

CRISPR human microbiome personal identification short tandem repeat

Journal

mSystems
ISSN: 2379-5077
Titre abrégé: mSystems
Pays: United States
ID NLM: 101680636

Informations de publication

Date de publication:
29 Oct 2024
Historique:
medline: 29 10 2024
pubmed: 29 10 2024
entrez: 29 10 2024
Statut: aheadofprint

Résumé

The high specificity of the human skin microbiome is expected to provide a new marker for personal identification. Metagenomic sequencing of clustered regularly interspaced short palindromic repeats (CRISPRs), which we call metaCRISPR typing, was shown to achieve personal identification accurately. However, the intra-individual variability observed in previous studies, which may be due to poor DNA yields from skin samples, has resulted in non-reproducible results. Furthermore, whether metaCRISPR typing can assist in the forensic human DNA analysis of low-biomass samples, from which the information obtained is insufficient, is unknown. In the present study, we sequenced serially diluted control streptococcal CRISPRs cloned into plasmids to determine the minimum copy number required to obtain reproducible results from metaCRISPR typing. We found that at least 10

Identifiants

pubmed: 39470190
doi: 10.1128/msystems.01038-24
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0103824

Auteurs

Kochi Toyomane (K)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Yuri Kimura (Y)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Takashi Fukagawa (T)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Takayuki Yamagishi (T)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Ken Watanabe (K)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Tomoko Akutsu (T)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Ai Asahi (A)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Satoshi Kubota (S)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Kazumasa Sekiguchi (K)

National Research Institute of Police Science, Kashiwa, Chiba, Japan.

Classifications MeSH