Homozygous variants in WDR83OS lead to a neurodevelopmental disorder with hypercholanemia.

ASTERIX CCDC47 ER translocation PAT complex WDR83OS developmental delay hypercholanemia intellectual disability pruritus

Journal

American journal of human genetics
ISSN: 1537-6605
Titre abrégé: Am J Hum Genet
Pays: United States
ID NLM: 0370475

Informations de publication

Date de publication:
23 Oct 2024
Historique:
received: 28 05 2023
revised: 01 10 2024
accepted: 03 10 2024
medline: 30 10 2024
pubmed: 30 10 2024
entrez: 29 10 2024
Statut: aheadofprint

Résumé

WD repeat domain 83 opposite strand (WDR83OS) encodes the 106-aa (amino acid) protein Asterix, which heterodimerizes with CCDC47 to form the PAT (protein associated with ER translocon) complex. This complex functions as a chaperone for large proteins containing transmembrane domains to ensure proper folding. Until recently, little was known about the role of WDR83OS or CCDC47 in human disease traits. However, biallelic variants in CCDC47 were identified in four unrelated families with trichohepatoneurodevelopmental syndrome, characterized by a neurodevelopmental disorder (NDD) with liver dysfunction. Three affected siblings in an additional family share a homozygous truncating WDR83OS variant and a phenotype of NDD, dysmorphic features, and liver dysfunction. Using family-based rare variant analyses of exome sequencing (ES) data and case matching through GeneMatcher, we describe the clinical phenotypes of 11 additional individuals in eight unrelated families (nine unrelated families, 14 individuals in total) with biallelic putative truncating variants in WDR83OS. Consistent clinical features include NDD (14/14), facial dysmorphism (13/14), intractable itching (9/14), and elevated bile acids (5/6). Whereas bile acids were significantly elevated in 5/6 of individuals tested, bilirubin was normal and liver enzymes were normal to mildly elevated in all 14 individuals. In three of six individuals for whom longitudinal data were available, we observed a progressive reduction in relative head circumference. A zebrafish model lacking Wdr83os function further supports its role in the nervous system, craniofacial development, and lipid absorption. Taken together, our data support a disease-gene association between biallelic loss-of-function of WDR83OS and a neurological disease trait with hypercholanemia.

Identifiants

pubmed: 39471804
pii: S0002-9297(24)00371-9
doi: 10.1016/j.ajhg.2024.10.002
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright © 2024 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of interests The Department of Molecular & Human Genetics at Baylor College of Medicine receives revenue from clinical genetic testing conducted at Baylor Genetics Laboratories. J.R.L. serves on the Scientific Advisory Board of Baylor Genetics. J.R.L. has stock ownership in 23andMe, is a paid consultant for Genome International, and is a co-inventor on multiple United States and European patents related to molecular diagnostics for inherited neuropathies, eye diseases, genomic disorders, and bacterial genomic fingerprinting.

Auteurs

Scott Barish (S)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.

Sheng-Jia Lin (SJ)

Genes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.

Reza Maroofian (R)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, London WC1N 3BG, UK.

Alper Gezdirici (A)

Department of Medical Genetics, Basaksehir Cam and Sakura City Hospital, Istanbul 34480, Turkey.

Hamoud Alhebby (H)

Division of Gastroenterology, Department of Pediatrics, Prince Sultan Military Medical City, Riyadh, Saudi Arabia.

Aurélien Trimouille (A)

Department of Medical Genetics, University Hospital of Bordeaux, 33076 Bordeaux, France; INSERM U1211, Laboratoire Maladies Rares: Génétique et Métabolisme, Bordeaux University, Bordeaux, France.

Marta Biderman Waberski (M)

Inova Health System, Falls Church, VA, USA.

Tadahiro Mitani (T)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.

Ilka Huber (I)

Department of Pediatrics, Sørlandet Hospital, Arendal, Norway.

Kristian Tveten (K)

Department of Medical Genetics, Telemark Hospital Trust, Skien, Norway.

Øystein L Holla (ØL)

Department of Medical Genetics, Telemark Hospital Trust, Skien, Norway.

Øyvind L Busk (ØL)

Department of Medical Genetics, Telemark Hospital Trust, Skien, Norway.

Henry Houlden (H)

Department of Neuromuscular Disorders, UCL Queen Square Institute of Neurology, London WC1N 3BG, UK.

Ehsan Ghayoor Karimiani (E)

Molecular and Clinical Sciences Institute, St. George's, University of London, Cranmer Terrace, London SW17 0RE, UK.

Mehran Beiraghi Toosi (M)

Department of Pediatric Diseases, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran; Neuroscience Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.

Reza Shervin Badv (R)

Children's Medical Center, Pediatrics Center of Excellence, Tehran University of Medical Sciences, Tehran, Iran.

Paria Najarzadeh Torbati (P)

Department of Medical Genetics, Next Generation Genetic Polyclinic, Mashhad, Iran.

Fatemeh Eghbal (F)

Department of Medical Genetics, Next Generation Genetic Polyclinic, Mashhad, Iran.

Javad Akhondian (J)

Neuroscience Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.

Ayat Al Safar (A)

College of Medicine, Imam Abdulrahman bin Faisal University, Dammam, Saudi Arabia; Department of Paediatrics, King Fahd Hospital of University, Al-khobar, Saudi Arabia.

Abdulrahman Alswaid (A)

King Saud Bin Abdulaziz University for Health Sciences, Department of Pediatrics, MC 1940, King Abdullah Specialized Children's Hospital, Riyadh, Saudi Arabia.

Giovanni Zifarelli (G)

CENTOGENE GmbH, Am Strande 7, 18055 Rostock, Germany.

Peter Bauer (P)

CENTOGENE GmbH, Am Strande 7, 18055 Rostock, Germany.

Dana Marafi (D)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Department of Pediatrics, Faculty of Medicine, Kuwait University, P.O. Box 24923, Safat 13110, Kuwait.

Jawid M Fatih (JM)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.

Kevin Huang (K)

Genes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.

Cassidy Petree (C)

Genes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.

Daniel G Calame (DG)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Section of Neurology and Developmental Neuroscience, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA.

Charlotte von der Lippe (C)

Department of Medical Genetics, Telemark Hospital Trust, Skien, Norway.

Fowzan S Alkuraya (FS)

Department of Translational Genomics, Center for Genomic Medicine, King Faisal Specialist Hospital and Research Centre, Riyadh, Saudi Arabia.

Sami Wali (S)

Division of Gastroenterology, Department of Pediatrics, Prince Sultan Military Medical City, Riyadh, Saudi Arabia.

James R Lupski (JR)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA; The Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA.

Gaurav K Varshney (GK)

Genes & Human Disease Research Program, Oklahoma Medical Research Foundation, Oklahoma City, OK 73104, USA.

Jennifer E Posey (JE)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: jennifer.posey@bcm.edu.

Davut Pehlivan (D)

Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Section of Neurology and Developmental Neuroscience, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA. Electronic address: pehlivan@bcm.edu.

Classifications MeSH