Elucidating ATP's role as solubilizer of biomolecular aggregate.

ATP condensation intrinsically disordered protein molecular biophysics none structural biology

Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
30 Oct 2024
Historique:
medline: 30 10 2024
pubmed: 30 10 2024
entrez: 30 10 2024
Statut: epublish

Résumé

Proteins occurring in significantly high concentrations in cellular environments (over 100 mg/ml) and functioning in crowded cytoplasm, often face the prodigious challenges of aggregation which are the pathological hallmark of aging and are critically responsible for a wide spectrum of rising human diseases. Here, we combine a joint-venture of complementary wet-lab experiment and molecular simulation to discern the potential ability of adenosine triphosphate (ATP) as solubilizer of protein aggregates. We show that ATP prevents both condensation of aggregation-prone intrinsically disordered protein Aβ40 and promotes dissolution of preformed aggregates. Computer simulation links ATP's solubilizing role to its ability to modulate protein's structural plasticity by unwinding protein conformation. We show that ATP is positioned as a superior biological solubilizer of protein aggregates over traditional chemical hydrotropes, potentially holding promises in therapeutic interventions in protein-aggregation-related diseases. Going beyond its conventional activity as energy currency, the amphiphilic nature of ATP enables its protein-specific interaction that would enhance ATP's efficiency in cellular processes.

Identifiants

pubmed: 39475790
doi: 10.7554/eLife.99150
pii: 99150
doi:
pii:

Substances chimiques

Adenosine Triphosphate 8L70Q75FXE
Protein Aggregates 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Department of Atomic Energy, Government of India
ID : RTI 4007
Organisme : Department of Science and Technology, Ministry of Science and Technology, India
ID : CRG/2023/001426

Informations de copyright

© 2024, Sarkar et al.

Déclaration de conflit d'intérêts

SS, SG, CM, DD, JM No competing interests declared

Références

Proc Natl Acad Sci U S A. 2018 May 22;115(21):E4758-E4766
pubmed: 29735687
J Alzheimers Dis. 2014;41(2):561-74
pubmed: 24625803
J Am Chem Soc. 2008 Jul 30;130(30):9829-35
pubmed: 18593163
JACS Au. 2023 Sep 04;3(9):2578-2585
pubmed: 37772172
Sci Adv. 2022 Sep 16;8(37):eabo7885
pubmed: 36103543
Science. 2017 May 19;356(6339):753-756
pubmed: 28522535
J Phys Chem B. 2017 Aug 10;121(31):7401-7411
pubmed: 28724291
Biophys J. 2007 Nov 1;93(9):3046-57
pubmed: 17675353
Biophys J. 2012 Aug 8;103(3):576-586
pubmed: 22947874
Elife. 2018 Jul 17;7:
pubmed: 30015615
Phys Chem Chem Phys. 2016 Nov 23;18(46):31446-31458
pubmed: 27827482
J Phys Chem B. 2019 Nov 21;123(46):9922-9933
pubmed: 31642322
J Chem Theory Comput. 2012 Sep 11;8(9):3257-3273
pubmed: 23341755
J Am Chem Soc. 2023 Jan 18;145(2):929-943
pubmed: 36608272
J Am Chem Soc. 2021 Aug 11;143(31):11982-11993
pubmed: 34338526
Langmuir. 2023 Dec 12;39(49):17581-17592
pubmed: 38044584
Phys Rev A Gen Phys. 1985 Mar;31(3):1695-1697
pubmed: 9895674
Trends Biochem Sci. 1990 Nov;15(11):430-4
pubmed: 2126155
Biochem Biophys Res Commun. 2020 Jun 11;526(4):1112-1117
pubmed: 32307080
J Phys Chem Lett. 2022 Jun 23;13(24):5660-5668
pubmed: 35709362
J Phys Chem B. 2020 Jan 9;124(1):210-223
pubmed: 31830415
Proteins. 2022 Aug;90(8):1606-1612
pubmed: 35297101
J Am Chem Soc. 2018 Feb 21;140(7):2386-2396
pubmed: 29323881
J Chem Phys. 2018 Sep 7;149(9):094101
pubmed: 30195312
J Phys Chem B. 1998 Apr 30;102(18):3586-616
pubmed: 24889800
JACS Au. 2021 Aug 13;1(10):1766-1777
pubmed: 34723279
Nat Commun. 2019 Mar 11;10(1):1155
pubmed: 30858367
J Mol Biol. 1969 Feb 14;39(3):539-44
pubmed: 5357211
J Am Chem Soc. 2006 Dec 20;128(50):16159-68
pubmed: 17165769
Biopolymers. 2011 Feb;95(2):127-34
pubmed: 20872872
ACS Biomater Sci Eng. 2023 Oct 9;9(10):5639-5652
pubmed: 37697623
J Chem Theory Comput. 2008 Jan;4(1):116-22
pubmed: 26619985
J Phys Chem B. 2021 Jul 22;125(28):7717-7731
pubmed: 34240882
Proc Natl Acad Sci U S A. 2021 Sep 28;118(39):
pubmed: 34544868
Adv Protein Chem. 1964;19:223-86
pubmed: 14268785
J Phys Chem B. 2011 Oct 6;115(39):11519-24
pubmed: 21863870
J Chem Theory Comput. 2012 Jan 10;8(1):348-362
pubmed: 22368531
Protein Sci. 2021 Jul;30(7):1277-1293
pubmed: 33829608
J Mol Biol. 2007 May 18;368(5):1448-57
pubmed: 17397862
Proc Natl Acad Sci U S A. 2015 Jul 28;112(30):9270-5
pubmed: 26170324
J Mol Biol. 2009 Jan 30;385(4):1052-63
pubmed: 19038267
J Chem Theory Comput. 2015 Nov 10;11(11):5525-42
pubmed: 26574340
Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):
pubmed: 34074792

Auteurs

Susmita Sarkar (S)

Tata Institute of Fundamental Research Hyderabad, Hyderabad, India.

Saurabh Gupta (S)

Indian Institute of Science Education and Research Kolkata, Kolkata, India.

Chiranjit Mahato (C)

Indian Institute of Science Education and Research Kolkata, Kolkata, India.

Dibyendu Das (D)

Indian Institute of Science Education and Research Kolkata, Kolkata, India.

Jagannath Mondal (J)

Tata Institute of Fundamental Research Hyderabad, Hyderabad, India.

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