A M Cabibbe

Affiliations

Emerging Bacterial Pathogens Unit, Division of Immunology, Transplantation and Infectious Diseases, IRCCS San Raffaele Scientific Institute, Milan, Italy.

ORCID: http://orcid.org/0000-0001-9727-6465

Publications (22)

Fluoroquinolone heteroresistance in Mycobacterium tuberculosis: detection by genotypic and phenotypic assays in experimentally mixed populations.

Scientific reports

Avec: L Rigouts , P Miotto , M Schats , P Lempens , A M Cabibbe , S Galbiati , V Lampasona , P de Rijk , D M Cirillo , B C de Jong

Whole genome sequencing of multidrug-resistant Mycobacterium tuberculosis isolates collected in the Czech Republic, 2005-2020.

Scientific reports

Avec: Matúš Dohál , Věra Dvořáková , Miluše Šperková , Martina Pinková , Andrea Spitaleri , Anders Norman , Andrea Maurizio Cabibbe , Erik Michael Rasmussen , Igor Porvazník , Mária Škereňová , Ivan Solovič , Daniela Maria Cirillo , Juraj Mokrý

Exportation of MDR TB to Europe from Setting with Actively Transmitted Persistent Strains in Peru.

Emerging infectious diseases

Avec: Fermín Acosta , Juan Agapito , Andrea Maurizio Cabibbe , Tatiana Cáceres , Christophe Sola , Laura Pérez-Lago , Estefanía Abascal , Marta Herranz , Erika Meza , Bernice Klotoe , Patricia Muñoz , Gian María Rossolini , Alessandro Bartoloni , Enrico Tortoli , Daniela María Cirillo , Eduardo Gotuzzo , Darío García de Viedma

Lack of association of novel mutation Asp397Gly in aftB gene with ethambutol resistance in clinical isolates of Mycobacterium tuberculosis.

Tuberculosis (Edinburgh, Scotland)

Avec: Astha Giri , Hassan Safi , Andrea Maurizio Cabibbe , Shraddha Gupta , Anshika Narang , Gaurav Tyagi , Kamal Shrivastava , Chanchal Kumar , Naresh Kumar Sharma , Subramanya Lingaraju , Alberto Trovato , Simone Battaglia , Daniela Maria Cirillo , Mridula Bose , David Alland , Mandira Varma-Basil

Update on the diagnosis of tuberculosis.

Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases

Avec: Irina Kontsevaya , Andrea Maurizio Cabibbe , Daniela Maria Cirillo , Andrew R DiNardo , Nicole Frahm , Stephen H Gillespie , David Holtzman , Lennard Meiwes , Elisa Petruccioli , Maja Reimann , Morten Ruhwald , Wilber Sabiiti , Francesca Saluzzo , Elisa Tagliani , Delia Goletti

A smooth tubercle bacillus from Ethiopia phylogenetically close to the Mycobacterium tuberculosis complex.

Nature communications

Avec: Bazezew Yenew , Arash Ghodousi , Getu Diriba , Ephrem Tesfaye , Andrea Maurizio Cabibbe , Misikir Amare , Shewki Moga , Ayinalem Alemu , Binyam Dagne , Waganeh Sinshaw , Hilina Mollalign , Abyot Meaza , Mengistu Tadesse , Dinka Fikadu Gamtesa , Yeshiwork Abebaw , Getachew Seid , Betselot Zerihun , Melak Getu , Matteo Chiacchiaretta , Cyril Gaudin , Michael Marceau , Xavier Didelot , Getachew Tolera , Saro Abdella , Abebaw Kebede , Muluwork Getahun , Zemedu Mehammed , Philip Supply , Daniela Maria Cirillo

Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.

Nature reviews. Microbiology

Avec: Conor J Meehan , Galo A Goig , Thomas A Kohl , Lennert Verboven , Anzaan Dippenaar , Matthew Ezewudo , Maha R Farhat , Jennifer L Guthrie , Kris Laukens , Paolo Miotto , Boatema Ofori-Anyinam , Viola Dreyer , Philip Supply , Anita Suresh , Christian Utpatel , Dick van Soolingen , Yang Zhou , Philip M Ashton , Daniela Brites , Andrea M Cabibbe , Bouke C de Jong , Margaretha de Vos , Fabrizio Menardo , Sebastien Gagneux , Qian Gao , Tim H Heupink , Qingyun Liu , Chloé Loiseau , Leen Rigouts , Timothy C Rodwell , Elisa Tagliani , Timothy M Walker , Robin M Warren , Yanlin Zhao , Matteo Zignol , Marco Schito , Jennifer Gardy , Daniela M Cirillo , Stefan Niemann , Inaki Comas , Annelies Van Rie

Integrative transnational analysis to dissect tuberculosis transmission events along the migratory route from Africa to Europe.

Journal of travel medicine

Avec: Miguel Martínez-Lirola , Rana Jajou , Vanessa Mathys , Anandi Martin , Andrea Maurizio Cabibbe , Ana Valera , Pedro J Sola-Campoy , Estefanía Abascal , Sandra Rodríguez-Maus , Jose Antonio Garrido-Cárdenas , Magdalena Bonillo , Álvaro Chiner-Oms , Begoña López , Silvia Vallejo-Godoy , Iñaki Comas , Patricia Muñoz , Daniela Maria Cirillo , Dick van Soolingen , Laura Pérez-Lago , Darío García de Viedma

Anti-tuberculosis drug resistance in Slovakia, 2018-2019: The first whole-genome epidemiological study.

Journal of clinical tuberculosis and other mycobacterial diseases

Avec: Matúš Dohál , Věra Dvořáková , Miluše Šperková , Igor Porvazník , Andrea Maurizio Cabibbe , Alberto Trovato , Andrea Spitaleri , Erik Michael Rasmussen , Kristián Pršo , Mária Škereňová , Daniela Maria Cirillo , Ivan Solovič , Juraj Mokrý

Whole genome sequencing of isoniazid monoresistant clinical isolates of Mycobacterium tuberculosis reveals novel genetic polymorphisms.

Tuberculosis (Edinburgh, Scotland)

Avec: Shraddha Gupta , Chanchal Kumar , Kamal Shrivastava , Varsha Chauhan , Anupriya Singh , Rohan Arora , Astha Giri , Andrea Maurizio Cabibbe , Naresh Kumar Sharma , Andrea Spitaleri , Daniela Maria Cirillo , Mridula Bose , Mandira Varma-Basil

Application of Targeted Next-Generation Sequencing Assay on a Portable Sequencing Platform for Culture-Free Detection of Drug-Resistant Tuberculosis from Clinical Samples.

Journal of clinical microbiology

Avec: Andrea M Cabibbe , Andrea Spitaleri , Simone Battaglia , Rebecca E Colman , Anita Suresh , Swapna Uplekar , Timothy C Rodwell , Daniela M Cirillo

Prevalence and genetic profiles of isoniazid resistance in tuberculosis patients: A multicountry analysis of cross-sectional data.

PLoS medicine

Avec: Anna S Dean , Matteo Zignol , Andrea Maurizio Cabibbe , Dennis Falzon , Philippe Glaziou , Daniela Maria Cirillo , Claudio U Köser , Lice Y Gonzalez-Angulo , Olga Tosas-Auget , Nazir Ismail , Sabira Tahseen , Maria Cecilia G Ama , Alena Skrahina , Natavan Alikhanova , S M Mostofa Kamal , Katherine Floyd

Screening of inmates transferred to Spain reveals a Peruvian prison as a reservoir of persistent Mycobacterium tuberculosis MDR strains and mixed infections.

Scientific reports

Avec: Estefanía Abascal , Marta Herranz , Fermín Acosta , Juan Agapito , Andrea M Cabibbe , Johana Monteserin , María Jesús Ruiz Serrano , Paloma Gijón , Francisco Fernández-González , Nuria Lozano , Álvaro Chiner-Oms , Tatiana Cáceres , Pilar Gómez Pintado , Enrique Acín , Eddy Valencia , Patricia Muñoz , Iñaki Comas , Daniela M Cirillo , Viviana Ritacco , Eduardo Gotuzzo , Darío García de Viedma

Characterization of Genomic Variants Associated with Resistance to Bedaquiline and Delamanid in Naive Mycobacterium tuberculosis Clinical Strains.

Journal of clinical microbiology

Avec: S Battaglia , A Spitaleri , A M Cabibbe , C J Meehan , C Utpatel , N Ismail , S Tahseen , A Skrahina , N Alikhanova , S M Mostofa Kamal , A Barbova , S Niemann , R Groenheit , A S Dean , M Zignol , L Rigouts , D M Cirillo

Comprehensive Drug Resistance Characterization of Pulmonary Tuberculosis in Algeria: Insights on

Microbial drug resistance (Larchmont, N.Y.)

Avec: Dalila Benremila , Ferhat Djoudi , Alima Gharout-Sait , Slimane Kheloufi , Andrea Spitaleri , Simone Battaglia , Andrea Maurizio Cabibbe , Daniela Maria Cirillo

Implementation of targeted next-generation sequencing for the diagnosis of drug-resistant tuberculosis in low-resource settings: a programmatic model, challenges, and initial outcomes.

Frontiers in public health

Avec: Leonardo de Araujo , Andrea Maurizio Cabibbe , Lusia Mhuulu , Nunurai Ruswa , Viola Dreyer , Azaria Diergaardt , Gunar Günther , Mareli Claassens , Christiane Gerlach , Christian Utpatel , Daniela Maria Cirillo , Emmanuel Nepolo , Stefan Niemann

Whole-Genome Sequencing of Drug-Resistant Mycobacterium tuberculosis Strains, Tunisia, 2012-2016.

Emerging infectious diseases

Avec: Imen Bouzouita , Andrea Maurizio Cabibbe , Alberto Trovato , Henda Daroui , Asma Ghariani , Basma Midouni , Leila Essalah , Emna Mehiri , Daniela Maria Cirillo , Leila Slim Saidi

Performance of the GenoType MTBDRsl V 2.0 for detecting second-line drugs resistance of Mycobacterium tuberculosis isolates in Tunisia.

Research in microbiology

Avec: Imen Bouzouita , Henda Draoui , Andrea Maurizio Cabibbe , Leila Essalah , Sana Bejaoui , Alberto Trovato , Férièle Messadi , Daniela Maria Cirillo , Leila Slim-Saidi

Rapid Diagnosis of XDR and Pre-XDR TB: A Systematic Review of Available Tools.

Archivos de bronconeumologia

Avec: Laura Saderi , Mariangela Puci , Biagio Di Lorenzo , Rosella Centis , Lia D'Ambrosio , Onno W Akkerman , Jan-Willem C Alffenaar , José A Caminero , Jeremiah Muhwa Chakaya , Justin T Denholm , Xhevat Kurhasani , Catherine W M Ong , Adrian Rendon , Denise Rossato Silva , Simon Tiberi , Dominik Zenner , Andrea M Cabibbe , Giovanni Battista Migliori , Giovanni Sotgiu

Advantages of long- and short-reads sequencing for the hybrid investigation of the

Frontiers in microbiology

Avec: Federico Di Marco , Andrea Spitaleri , Simone Battaglia , Virginia Batignani , Andrea Maurizio Cabibbe , Daniela Maria Cirillo

Nanopore-based targeted sequencing test for direct tuberculosis identification, genotyping, and detection of drug resistance mutations: a side-by-side comparison of targeted next-generation sequencing technologies.

Journal of clinical microbiology

Avec: Andrea Maurizio Cabibbe , Kiarash Moghaddasi , Virginia Batignani , Godstime Stephen Kojo Morgan , Federico Di Marco , Daniela Maria Cirillo

Targeted next-generation sequencing of

Emerging microbes & infections

Avec: Mohammad Khaja Mafij Uddin , Andrea Maurizio Cabibbe , Rumana Nasrin , Arash Ghodousi , Fahim Alam Nobel , S M Mazidur Rahman , Shahriar Ahmed , Md Fahim Ather , S M Abdur Razzaque , Md Abu Raihan , Pronab Kumar Modak , Jean Luc Berland , Wayne Van Gemert , Sardar Munim Ibna Mohsin , Daniela Maria Cirillo , Sayera Banu

Réseau de co-auteurs

Andrea Maurizio Cabibbe 16 collaborations

Daniela Maria Cirillo 15 collaborations

Andrea Spitaleri 6 collaborations

Alberto Trovato 4 collaborations

Simone Battaglia 4 collaborations

Andrea M Cabibbe 4 collaborations

Estefanía Abascal 3 collaborations

Patricia Muñoz 3 collaborations

Darío García de Viedma 3 collaborations

Daniela M Cirillo 3 collaborations

L Rigouts 2 collaborations

D M Cirillo 2 collaborations

Matúš Dohál 2 collaborations

Věra Dvořáková 2 collaborations

Miluše Šperková 2 collaborations

Erik Michael Rasmussen 2 collaborations

Igor Porvazník 2 collaborations

Mária Škereňová 2 collaborations

Ivan Solovič 2 collaborations

Juraj Mokrý 2 collaborations

Fermín Acosta 2 collaborations

Juan Agapito 2 collaborations

Tatiana Cáceres 2 collaborations

Laura Pérez-Lago 2 collaborations

Marta Herranz 2 collaborations

Eduardo Gotuzzo 2 collaborations

Astha Giri 2 collaborations

Shraddha Gupta 2 collaborations

Kamal Shrivastava 2 collaborations

Chanchal Kumar 2 collaborations

Naresh Kumar Sharma 2 collaborations

Mridula Bose 2 collaborations

Mandira Varma-Basil 2 collaborations

Elisa Tagliani 2 collaborations

Arash Ghodousi 2 collaborations

Philip Supply 2 collaborations

Viola Dreyer 2 collaborations

Anita Suresh 2 collaborations

Christian Utpatel 2 collaborations

Dick van Soolingen 2 collaborations

Timothy C Rodwell 2 collaborations

Matteo Zignol 2 collaborations

Stefan Niemann 2 collaborations

Álvaro Chiner-Oms 2 collaborations

Iñaki Comas 2 collaborations

S M Mostofa Kamal 2 collaborations

Imen Bouzouita 2 collaborations

Leila Essalah 2 collaborations

Federico Di Marco 2 collaborations

Virginia Batignani 2 collaborations

P Miotto 1 collaboration

M Schats 1 collaboration

P Lempens 1 collaboration

S Galbiati 1 collaboration

V Lampasona 1 collaboration

P de Rijk 1 collaboration

B C de Jong 1 collaboration

Martina Pinková 1 collaboration

Anders Norman 1 collaboration

Christophe Sola 1 collaboration

Erika Meza 1 collaboration

Bernice Klotoe 1 collaboration

Gian María Rossolini 1 collaboration

Alessandro Bartoloni 1 collaboration

Enrico Tortoli 1 collaboration

Daniela María Cirillo 1 collaboration

Hassan Safi 1 collaboration

Anshika Narang 1 collaboration

Gaurav Tyagi 1 collaboration

Subramanya Lingaraju 1 collaboration

David Alland 1 collaboration

Irina Kontsevaya 1 collaboration

Andrew R DiNardo 1 collaboration

Nicole Frahm 1 collaboration

Stephen H Gillespie 1 collaboration

David Holtzman 1 collaboration

Lennard Meiwes 1 collaboration

Elisa Petruccioli 1 collaboration

Maja Reimann 1 collaboration

Morten Ruhwald 1 collaboration

Wilber Sabiiti 1 collaboration

Francesca Saluzzo 1 collaboration

Delia Goletti 1 collaboration

Bazezew Yenew 1 collaboration

Getu Diriba 1 collaboration

Ephrem Tesfaye 1 collaboration

Misikir Amare 1 collaboration

Shewki Moga 1 collaboration

Ayinalem Alemu 1 collaboration

Binyam Dagne 1 collaboration

Waganeh Sinshaw 1 collaboration

Hilina Mollalign 1 collaboration

Abyot Meaza 1 collaboration

Mengistu Tadesse 1 collaboration

Dinka Fikadu Gamtesa 1 collaboration

Yeshiwork Abebaw 1 collaboration

Getachew Seid 1 collaboration

Betselot Zerihun 1 collaboration

Melak Getu 1 collaboration

Matteo Chiacchiaretta 1 collaboration

Cyril Gaudin 1 collaboration

Michael Marceau 1 collaboration

Xavier Didelot 1 collaboration

Getachew Tolera 1 collaboration

Saro Abdella 1 collaboration

Abebaw Kebede 1 collaboration

Muluwork Getahun 1 collaboration

Zemedu Mehammed 1 collaboration

Conor J Meehan 1 collaboration

Galo A Goig 1 collaboration

Thomas A Kohl 1 collaboration

Lennert Verboven 1 collaboration

Anzaan Dippenaar 1 collaboration

Matthew Ezewudo 1 collaboration

Maha R Farhat 1 collaboration

Jennifer L Guthrie 1 collaboration

Kris Laukens 1 collaboration

Paolo Miotto 1 collaboration

Boatema Ofori-Anyinam 1 collaboration

Yang Zhou 1 collaboration

Philip M Ashton 1 collaboration

Daniela Brites 1 collaboration

Bouke C de Jong 1 collaboration

Margaretha de Vos 1 collaboration

Fabrizio Menardo 1 collaboration

Sebastien Gagneux 1 collaboration

Qian Gao 1 collaboration

Tim H Heupink 1 collaboration

Qingyun Liu 1 collaboration

Chloé Loiseau 1 collaboration

Leen Rigouts 1 collaboration

Timothy M Walker 1 collaboration

Robin M Warren 1 collaboration

Yanlin Zhao 1 collaboration

Marco Schito 1 collaboration

Jennifer Gardy 1 collaboration

Inaki Comas 1 collaboration

Annelies Van Rie 1 collaboration

Miguel Martínez-Lirola 1 collaboration

Rana Jajou 1 collaboration

Vanessa Mathys 1 collaboration

Anandi Martin 1 collaboration

Ana Valera 1 collaboration

Pedro J Sola-Campoy 1 collaboration

Sandra Rodríguez-Maus 1 collaboration

Jose Antonio Garrido-Cárdenas 1 collaboration

Magdalena Bonillo 1 collaboration

Begoña López 1 collaboration

Silvia Vallejo-Godoy 1 collaboration

Kristián Pršo 1 collaboration

Varsha Chauhan 1 collaboration

Anupriya Singh 1 collaboration

Rohan Arora 1 collaboration

Rebecca E Colman 1 collaboration

Swapna Uplekar 1 collaboration

Anna S Dean 1 collaboration

Dennis Falzon 1 collaboration

Philippe Glaziou 1 collaboration

Claudio U Köser 1 collaboration

Lice Y Gonzalez-Angulo 1 collaboration

Olga Tosas-Auget 1 collaboration

Nazir Ismail 1 collaboration

Sabira Tahseen 1 collaboration

Maria Cecilia G Ama 1 collaboration

Alena Skrahina 1 collaboration

Natavan Alikhanova 1 collaboration

Katherine Floyd 1 collaboration

Johana Monteserin 1 collaboration

María Jesús Ruiz Serrano 1 collaboration

Paloma Gijón 1 collaboration

Francisco Fernández-González 1 collaboration

Nuria Lozano 1 collaboration

Pilar Gómez Pintado 1 collaboration

Enrique Acín 1 collaboration

Eddy Valencia 1 collaboration

Viviana Ritacco 1 collaboration

S Battaglia 1 collaboration

A Spitaleri 1 collaboration

C J Meehan 1 collaboration

C Utpatel 1 collaboration

N Ismail 1 collaboration

S Tahseen 1 collaboration

A Skrahina 1 collaboration

N Alikhanova 1 collaboration

A Barbova 1 collaboration

S Niemann 1 collaboration

R Groenheit 1 collaboration

A S Dean 1 collaboration

M Zignol 1 collaboration

Dalila Benremila 1 collaboration

Ferhat Djoudi 1 collaboration

Alima Gharout-Sait 1 collaboration

Slimane Kheloufi 1 collaboration

Leonardo de Araujo 1 collaboration

Lusia Mhuulu 1 collaboration

Nunurai Ruswa 1 collaboration

Azaria Diergaardt 1 collaboration

Gunar Günther 1 collaboration

Mareli Claassens 1 collaboration

Christiane Gerlach 1 collaboration

Emmanuel Nepolo 1 collaboration

Henda Daroui 1 collaboration

Asma Ghariani 1 collaboration

Basma Midouni 1 collaboration

Emna Mehiri 1 collaboration

Leila Slim Saidi 1 collaboration

Henda Draoui 1 collaboration

Sana Bejaoui 1 collaboration

Férièle Messadi 1 collaboration

Leila Slim-Saidi 1 collaboration

Laura Saderi 1 collaboration

Mariangela Puci 1 collaboration

Biagio Di Lorenzo 1 collaboration

Rosella Centis 1 collaboration

Lia D'Ambrosio 1 collaboration

Onno W Akkerman 1 collaboration

Jan-Willem C Alffenaar 1 collaboration

José A Caminero 1 collaboration

Jeremiah Muhwa Chakaya 1 collaboration

Justin T Denholm 1 collaboration

Xhevat Kurhasani 1 collaboration

Catherine W M Ong 1 collaboration

Adrian Rendon 1 collaboration

Denise Rossato Silva 1 collaboration

Simon Tiberi 1 collaboration

Dominik Zenner 1 collaboration

Giovanni Battista Migliori 1 collaboration

Giovanni Sotgiu 1 collaboration

Kiarash Moghaddasi 1 collaboration

Godstime Stephen Kojo Morgan 1 collaboration

Mohammad Khaja Mafij Uddin 1 collaboration

Rumana Nasrin 1 collaboration

Fahim Alam Nobel 1 collaboration

S M Mazidur Rahman 1 collaboration

Shahriar Ahmed 1 collaboration

Md Fahim Ather 1 collaboration

S M Abdur Razzaque 1 collaboration

Md Abu Raihan 1 collaboration

Pronab Kumar Modak 1 collaboration

Jean Luc Berland 1 collaboration

Wayne Van Gemert 1 collaboration

Sardar Munim Ibna Mohsin 1 collaboration

Sayera Banu 1 collaboration