Adam Thrash

Affiliations

Institute for Genomics, Biocomputing & Biotechnology, Mississippi State University, Mississippi State, MS, USA. thrash@igbb.msstate.edu.
Department of Computer Science and Engineering, Mississippi State University, Mississippi State, MS, USA. thrash@igbb.msstate.edu.

ORCID: http://orcid.org/0000-0002-4097-7663

Publications (17)

Toward a more holistic method of genome assembly assessment.

BMC bioinformatics

Avec: Adam Thrash , Federico Hoffmann , Andy Perkins

Keanu: a novel visualization tool to explore biodiversity in metagenomes.

BMC bioinformatics

Avec: Adam Thrash , Mark Arick , Robyn A Barbato , Robert M Jones , Thomas A Douglas , Julie Esdale , Edward J Perkins , Natàlia Garcia-Reyero

In silico prediction and expression analysis of vaccine candidate genes of Campylobacter jejuni.

Poultry science

Avec: Sabin Poudel , Linan Jia , Mark A Arick , Chuan-Yu Hsu , Adam Thrash , Anuraj T Sukumaran , Pratima Adhikari , Aaron S Kiess , Li Zhang

A high-quality chromosome-level genome assembly of rohu carp, Labeo rohita, and its utilization in SNP-based exploration of gene flow and sex determination.

G3 (Bethesda, Md.)

Avec: Mark A Arick , Corrinne E Grover , Chuan-Yu Hsu , Zenaida Magbanua , Olga Pechanova , Emma R Miller , Adam Thrash , Ramey C Youngblood , Lauren Ezzell , Md Samsul Alam , John A H Benzie , Matthew G Hamilton , Attila Karsi , Mark L Lawrence , Daniel G Peterson

AOPERA: A proposed methodology and inventory of effective tools to link chemicals to adverse outcome pathways.

ALTEX

Avec: Taylor E Rycroft , Christy M Foran , Adam Thrash , Jeffrey C Cegan , Robert Zollinger , Igor Linkov , Edward J Perkins , Natàlia Garcia-Reyero

Comparative Analysis of Multiple GWAS Results Identifies Metabolic Pathways Associated with Resistance to

Toxins

Avec: Marilyn L Warburton , Dan Jeffers , Jessie Spencer Smith , Carlos Scapim , Renan Uhdre , Adam Thrash , William Paul Williams

Genomic diversity and evolution in the Hawaiian Islands endemic Kokia (Malvaceae).

G3 (Bethesda, Md.)

Avec: Ehsan Kayal , Mark A Arick Ii , Chuan-Yu Hsu , Adam Thrash , Mitsuko Yorkston , Clifford W Morden , Jonathan F Wendel , Daniel G Peterson , Corrinne E Grover

A Pathway Association Study Tool for GWAS Analyses of Metabolic Pathway Information.

Journal of visualized experiments : JoVE

Avec: Adam Thrash , Marilyn L Warburton

Association study of crude seed protein and fat concentration in a USDA pea diversity panel.

The plant genome

Avec: Renan Uhdre , Clarice J Coyne , Britton Bourland , Julia Piaskowski , Ping Zheng , Girish M Ganjyal , Zhiwu Zhang , Rebecca J McGee , Dorrie Main , Nonoy Bandillo , Mario Morales , Yu Ma , Chengci Chen , William Franck , Adam Thrash , Marilyn L Warburton

Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing.

Genome biology and evolution

Avec: Corrinne E Grover , Mark A Arick , Adam Thrash , Justin L Conover , William S Sanders , Daniel G Peterson , James E Frelichowski , Jodi A Scheffler , Brian E Scheffler , Jonathan F Wendel

Impacts on Atlantic Killifish from Neurotoxicants: Genes, Behavior, and Population-Relevant Outcomes.

Environmental science & technology

Avec: Janice L Albers , Lori N Ivan , Bryan W Clark , Diane E Nacci , Rebekah H Klingler , Adam Thrash , Juan P Steibel , Natalia Garcia-Reyero Vinas , Michael J Carvan , Cheryl A Murphy

Leveraging GWAS data to identify metabolic pathways and networks involved in maize lipid biosynthesis.

The Plant journal : for cell and molecular biology

Avec: Hui Li , Adam Thrash , Juliet D Tang , Linlin He , Jianbing Yan , Marilyn L Warburton

PAST: The Pathway Association Studies Tool to Infer Biological Meaning from GWAS Datasets.

Plants (Basel, Switzerland)

Avec: Adam Thrash , Juliet D Tang , Mason DeOrnellis , Daniel G Peterson , Marilyn L Warburton

What do States Recommend We Teach Adolescents about Sexual Consent? A Content Analysis of K-12 Health Education Standards in the US.

Journal of sex research

Avec: Tiffany L Marcantonio , Arianna Lestingi , Melissa Meadows , Anna Thrash , James DiLoreto-Hill

Complete Genome Sequences of Four Campylobacter jejuni Strains Isolated from Retail Chicken Meat and Broiler Feces.

Microbiology resource announcements

Avec: Sabin Poudel , Tianmin Li , Mark A Arick , Chuan-Yu Hsu , Adam Thrash , Anuraj T Sukumaran , Pratima Adhikari , Aaron S Kiess , Li Zhang

Dual Domestication, Diversity, and Differential Introgression in Old World Cotton Diploids.

Genome biology and evolution

Avec: Corrinne E Grover , Mark A Arick , Adam Thrash , Joel Sharbrough , Guanjing Hu , Daojun Yuan , Samantha Snodgrass , Emma R Miller , Thiruvarangan Ramaraj , Daniel G Peterson , Joshua A Udall , Jonathan F Wendel

Large Language Models in an App: Conducting a Qualitative Synthetic Data Analysis of How Snapchat's "My AI" Responds to Questions About Sexual Consent, Sexual Refusals, Sexual Assault, and Sexting.

Journal of sex research

Avec: Tiffany L Marcantonio , Gracie Avery , Anna Thrash , Ruschelle M Leone

Réseau de co-auteurs

Mark A Arick 5 collaborations

Daniel G Peterson 5 collaborations

Marilyn L Warburton 5 collaborations

Chuan-Yu Hsu 4 collaborations

Corrinne E Grover 4 collaborations

Jonathan F Wendel 3 collaborations

Edward J Perkins 2 collaborations

Natàlia Garcia-Reyero 2 collaborations

Sabin Poudel 2 collaborations

Anuraj T Sukumaran 2 collaborations

Pratima Adhikari 2 collaborations

Aaron S Kiess 2 collaborations

Li Zhang 2 collaborations

Emma R Miller 2 collaborations

Renan Uhdre 2 collaborations

Juliet D Tang 2 collaborations

Tiffany L Marcantonio 2 collaborations

Anna Thrash 2 collaborations

Federico Hoffmann 1 collaboration

Andy Perkins 1 collaboration

Mark Arick 1 collaboration

Robyn A Barbato 1 collaboration

Robert M Jones 1 collaboration

Thomas A Douglas 1 collaboration

Julie Esdale 1 collaboration

Linan Jia 1 collaboration

Zenaida Magbanua 1 collaboration

Olga Pechanova 1 collaboration

Ramey C Youngblood 1 collaboration

Lauren Ezzell 1 collaboration

Md Samsul Alam 1 collaboration

John A H Benzie 1 collaboration

Matthew G Hamilton 1 collaboration

Attila Karsi 1 collaboration

Mark L Lawrence 1 collaboration

Taylor E Rycroft 1 collaboration

Christy M Foran 1 collaboration

Jeffrey C Cegan 1 collaboration

Robert Zollinger 1 collaboration

Igor Linkov 1 collaboration

Dan Jeffers 1 collaboration

Jessie Spencer Smith 1 collaboration

Carlos Scapim 1 collaboration

William Paul Williams 1 collaboration

Ehsan Kayal 1 collaboration

Mark A Arick Ii 1 collaboration

Mitsuko Yorkston 1 collaboration

Clifford W Morden 1 collaboration

Clarice J Coyne 1 collaboration

Britton Bourland 1 collaboration

Julia Piaskowski 1 collaboration

Ping Zheng 1 collaboration

Girish M Ganjyal 1 collaboration

Zhiwu Zhang 1 collaboration

Rebecca J McGee 1 collaboration

Dorrie Main 1 collaboration

Nonoy Bandillo 1 collaboration

Mario Morales 1 collaboration

Yu Ma 1 collaboration

Chengci Chen 1 collaboration

William Franck 1 collaboration

Justin L Conover 1 collaboration

William S Sanders 1 collaboration

James E Frelichowski 1 collaboration

Jodi A Scheffler 1 collaboration

Brian E Scheffler 1 collaboration

Janice L Albers 1 collaboration

Lori N Ivan 1 collaboration

Bryan W Clark 1 collaboration

Diane E Nacci 1 collaboration

Rebekah H Klingler 1 collaboration

Juan P Steibel 1 collaboration

Natalia Garcia-Reyero Vinas 1 collaboration

Michael J Carvan 1 collaboration

Cheryl A Murphy 1 collaboration

Hui Li 1 collaboration

Linlin He 1 collaboration

Jianbing Yan 1 collaboration

Mason DeOrnellis 1 collaboration

Arianna Lestingi 1 collaboration

Melissa Meadows 1 collaboration

James DiLoreto-Hill 1 collaboration

Tianmin Li 1 collaboration

Joel Sharbrough 1 collaboration

Guanjing Hu 1 collaboration

Daojun Yuan 1 collaboration

Samantha Snodgrass 1 collaboration

Thiruvarangan Ramaraj 1 collaboration

Joshua A Udall 1 collaboration

Gracie Avery 1 collaboration

Ruschelle M Leone 1 collaboration