Alex Krasnitz

Affiliations

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

Publications (10)

Multiplex accurate sensitive quantitation (MASQ) with application to minimal residual disease in acute myeloid leukemia.

Nucleic acids research

Avec: Andrea B Moffitt , Mona S Spector , Peter Andrews , Jude Kendall , Joan Alexander , Asya Stepansky , BeiCong Ma , Jonathan Kolitz , Nicholas Chiorazzi , Steven L Allen , Alex Krasnitz , Michael Wigler , Dan Levy , Zihua Wang

SOAT1 promotes mevalonate pathway dependency in pancreatic cancer.

The Journal of experimental medicine

Avec: Tobiloba E Oni , Giulia Biffi , Lindsey A Baker , Yuan Hao , Claudia Tonelli , Tim D D Somerville , Astrid Deschênes , Pascal Belleau , Chang-Il Hwang , Francisco J Sánchez-Rivera , Hilary Cox , Erin Brosnan , Abhishek Doshi , Rebecca P Lumia , Kimia Khaledi , Youngkyu Park , Lloyd C Trotman , Scott W Lowe , Alexander Krasnitz , Christopher R Vakoc , David A Tuveson

Copolymerization of single-cell nucleic acids into balls of acrylamide gel.

Genome research

Avec: Siran Li , Jude Kendall , Sarah Park , Zihua Wang , Joan Alexander , Andrea Moffitt , Nissim Ranade , Cassidy Danyko , Bruno Gegenhuber , Stephan Fischer , Brian D Robinson , Herbert Lepor , Jessica Tollkuhn , Jesse Gillis , Eric Brouzes , Alex Krasnitz , Dan Levy , Michael Wigler

Statistically Supported Identification of Tumor Subtypes.

Methods in molecular biology (Clifton, N.J.)

Avec: Guoli Sun , Alexander Krasnitz

Genetic Ancestry Inference from Cancer-Derived Molecular Data across Genomic and Transcriptomic Platforms.

Cancer research

Avec: Pascal Belleau , Astrid Deschênes , Nyasha Chambwe , David A Tuveson , Alexander Krasnitz

CORE: A Software Tool for Delineating Regions of Recurrent DNA Copy Number Alteration in Cancer.

Methods in molecular biology (Clifton, N.J.)

Avec: Guoli Sun , Alexander Krasnitz

Integrated Computational Pipeline for Single-Cell Genomic Profiling.

JCO clinical cancer informatics

Avec: Lubomir Chorbadjiev , Jude Kendall , Joan Alexander , Viacheslav Zhygulin , Junyan Song , Michael Wigler , Alexander Krasnitz

Ordered and deterministic cancer genome evolution after p53 loss.

Nature

Avec: Timour Baslan , John P Morris , Zhen Zhao , Jose Reyes , Yu-Jui Ho , Kaloyan M Tsanov , Jonathan Bermeo , Sha Tian , Sean Zhang , Gokce Askan , Aslihan Yavas , Nicolas Lecomte , Amanda Erakky , Anna M Varghese , Amy Zhang , Jude Kendall , Elena Ghiban , Lubomir Chorbadjiev , Jie Wu , Nevenka Dimitrova , Kalyani Chadalavada , Gouri J Nanjangud , Chaitanya Bandlamudi , Yixiao Gong , Mark T A Donoghue , Nicholas D Socci , Alex Krasnitz , Faiyaz Notta , Steve D Leach , Christine A Iacobuzio-Donahue , Scott W Lowe

Intraductal Transplantation Models of Human Pancreatic Ductal Adenocarcinoma Reveal Progressive Transition of Molecular Subtypes.

Cancer discovery

Avec: Koji Miyabayashi , Lindsey A Baker , Astrid Deschênes , Benno Traub , Giuseppina Caligiuri , Dennis Plenker , Brinda Alagesan , Pascal Belleau , Siran Li , Jude Kendall , Gun Ho Jang , Risa Karakida Kawaguchi , Tim D D Somerville , Hervé Tiriac , Chang-Il Hwang , Richard A Burkhart , Nicholas J Roberts , Laura D Wood , Ralph H Hruban , Jesse Gillis , Alexander Krasnitz , Christopher R Vakoc , Michael Wigler , Faiyaz Notta , Steven Gallinger , Youngkyu Park , David A Tuveson

Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing.

eLife

Avec: Timour Baslan , Jude Kendall , Konstantin Volyanskyy , Katherine McNamara , Hilary Cox , Sean D'Italia , Frank Ambrosio , Michael Riggs , Linda Rodgers , Anthony Leotta , Junyan Song , Yong Mao , Jie Wu , Ronak Shah , Rodrigo Gularte-Mérida , Kalyani Chadalavada , Gouri Nanjangud , Vinay Varadan , Assaf Gordon , Christina Curtis , Alex Krasnitz , Nevenka Dimitrova , Lyndsay Harris , Michael Wigler , James Hicks

Réseau de co-auteurs

Jude Kendall 6 collaborations

Alexander Krasnitz 6 collaborations

Michael Wigler 5 collaborations

Joan Alexander 3 collaborations

Astrid Deschênes 3 collaborations

Pascal Belleau 3 collaborations

David A Tuveson 3 collaborations

Dan Levy 2 collaborations

Zihua Wang 2 collaborations

Lindsey A Baker 2 collaborations

Tim D D Somerville 2 collaborations

Chang-Il Hwang 2 collaborations

Hilary Cox 2 collaborations

Youngkyu Park 2 collaborations

Scott W Lowe 2 collaborations

Christopher R Vakoc 2 collaborations

Siran Li 2 collaborations

Jesse Gillis 2 collaborations

Guoli Sun 2 collaborations

Lubomir Chorbadjiev 2 collaborations

Junyan Song 2 collaborations

Timour Baslan 2 collaborations

Jie Wu 2 collaborations

Nevenka Dimitrova 2 collaborations

Kalyani Chadalavada 2 collaborations

Faiyaz Notta 2 collaborations

Andrea B Moffitt 1 collaboration

Mona S Spector 1 collaboration

Peter Andrews 1 collaboration

Asya Stepansky 1 collaboration

BeiCong Ma 1 collaboration

Jonathan Kolitz 1 collaboration

Nicholas Chiorazzi 1 collaboration

Steven L Allen 1 collaboration

Tobiloba E Oni 1 collaboration

Giulia Biffi 1 collaboration

Yuan Hao 1 collaboration

Claudia Tonelli 1 collaboration

Francisco J Sánchez-Rivera 1 collaboration

Erin Brosnan 1 collaboration

Abhishek Doshi 1 collaboration

Rebecca P Lumia 1 collaboration

Kimia Khaledi 1 collaboration

Lloyd C Trotman 1 collaboration

Sarah Park 1 collaboration

Andrea Moffitt 1 collaboration

Nissim Ranade 1 collaboration

Cassidy Danyko 1 collaboration

Bruno Gegenhuber 1 collaboration

Stephan Fischer 1 collaboration

Brian D Robinson 1 collaboration

Herbert Lepor 1 collaboration

Jessica Tollkuhn 1 collaboration

Eric Brouzes 1 collaboration

Nyasha Chambwe 1 collaboration

Viacheslav Zhygulin 1 collaboration

John P Morris 1 collaboration

Zhen Zhao 1 collaboration

Jose Reyes 1 collaboration

Yu-Jui Ho 1 collaboration

Kaloyan M Tsanov 1 collaboration

Jonathan Bermeo 1 collaboration

Sha Tian 1 collaboration

Sean Zhang 1 collaboration

Gokce Askan 1 collaboration

Aslihan Yavas 1 collaboration

Nicolas Lecomte 1 collaboration

Amanda Erakky 1 collaboration

Anna M Varghese 1 collaboration

Amy Zhang 1 collaboration

Elena Ghiban 1 collaboration

Gouri J Nanjangud 1 collaboration

Chaitanya Bandlamudi 1 collaboration

Yixiao Gong 1 collaboration

Mark T A Donoghue 1 collaboration

Nicholas D Socci 1 collaboration

Steve D Leach 1 collaboration

Christine A Iacobuzio-Donahue 1 collaboration

Koji Miyabayashi 1 collaboration

Benno Traub 1 collaboration

Giuseppina Caligiuri 1 collaboration

Dennis Plenker 1 collaboration

Brinda Alagesan 1 collaboration

Gun Ho Jang 1 collaboration

Risa Karakida Kawaguchi 1 collaboration

Hervé Tiriac 1 collaboration

Richard A Burkhart 1 collaboration

Nicholas J Roberts 1 collaboration

Laura D Wood 1 collaboration

Ralph H Hruban 1 collaboration

Steven Gallinger 1 collaboration

Konstantin Volyanskyy 1 collaboration

Katherine McNamara 1 collaboration

Sean D'Italia 1 collaboration

Frank Ambrosio 1 collaboration

Michael Riggs 1 collaboration

Linda Rodgers 1 collaboration

Anthony Leotta 1 collaboration

Yong Mao 1 collaboration

Ronak Shah 1 collaboration

Rodrigo Gularte-Mérida 1 collaboration

Gouri Nanjangud 1 collaboration

Vinay Varadan 1 collaboration

Assaf Gordon 1 collaboration

Christina Curtis 1 collaboration

Lyndsay Harris 1 collaboration

James Hicks 1 collaboration