Alexander S Pym

Affiliations

Africa Health Research Institute, Durban, South Africa.

Publications (10)

Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture.

BMC genomics

Avec: Camus Nimmo , Liam P Shaw , Ronan Doyle , Rachel Williams , Kayleen Brien , Carrie Burgess , Judith Breuer , Francois Balloux , Alexander S Pym

Population-level emergence of bedaquiline and clofazimine resistance-associated variants among patients with drug-resistant tuberculosis in southern Africa: a phenotypic and phylogenetic analysis.

The Lancet. Microbe

Avec: Camus Nimmo , James Millard , Lucy van Dorp , Kayleen Brien , Sashen Moodley , Allison Wolf , Alison D Grant , Nesri Padayatchi , Alexander S Pym , François Balloux , Max O'Donnell

Dynamics of within-host Mycobacterium tuberculosis diversity and heteroresistance during treatment.

EBioMedicine

Avec: Camus Nimmo , Kayleen Brien , James Millard , Alison D Grant , Nesri Padayatchi , Alexander S Pym , Max O'Donnell , Richard Goldstein , Judith Breuer , François Balloux

Antimicrobial agents and chemotherapy

Avec: Thuli Mthiyane , James Millard , John Adamson , Yusentha Balakrishna , Cathy Connolly , Andrew Owen , Roxana Rustomjee , Keertan Dheda , Helen McIlleron , Alexander S Pym

Publisher Correction: Group 3 innate lymphoid cells mediate early protective immunity against tuberculosis.

Nature

Avec: Amanda Ardain , Racquel Domingo-Gonzalez , Shibali Das , Samuel W Kazer , Nicole C Howard , Alveera Singh , Mushtaq Ahmed , Shepherd Nhamoyebonde , Javier Rangel-Moreno , Paul Ogongo , Lan Lu , Duran Ramsuran , Maria de la Luz Garcia-Hernandez , Tyler K Ulland , Matthew Darby , Eugene Park , Farina Karim , Laura Melocchi , Rajhmun Madansein , Kaylesh Jay Dullabh , Micah Dunlap , Nancy Marin-Agudelo , Takashi Ebihara , Thumbi Ndung'u , Deepak Kaushal , Alexander S Pym , Jay K Kolls , Adrie Steyn , Joaquín Zúñiga , William Horsnell , Wayne M Yokoyama , Alex K Shalek , Henrik N Kløverpris , Marco Colonna , Alasdair Leslie , Shabaana A Khader

Group 3 innate lymphoid cells mediate early protective immunity against tuberculosis.

Nature

Avec: Amanda Ardain , Racquel Domingo-Gonzalez , Shibali Das , Samuel W Kazer , Nicole C Howard , Alveera Singh , Mushtaq Ahmed , Shepherd Nhamoyebonde , Javier Rangel-Moreno , Paul Ogongo , Lan Lu , Duran Ramsuran , Maria de la Luz Garcia-Hernandez , Tyler K Ulland , Matthew Darby , Eugene Park , Farina Karim , Laura Melocchi , Rajhmun Madansein , Kaylesh Jay Dullabh , Micah Dunlap , Nancy Marin-Agudelo , Takashi Ebihara , Thumbi Ndung'u , Deepak Kaushal , Alexander S Pym , Jay K Kolls , Adrie Steyn , Joaquín Zúñiga , William Horsnell , Wayne M Yokoyama , Alex K Shalek , Henrik N Kløverpris , Marco Colonna , Alasdair Leslie , Shabaana A Khader

A Rapid Drug Resistance Genotyping Workflow for Mycobacterium tuberculosis, Using Targeted Isothermal Amplification and Nanopore Sequencing.

Microbiology spectrum

Avec: Harriet D Gliddon , Dan Frampton , Vanisha Munsamy , Jude Heaney , Thomas Pataillot-Meakin , Eleni Nastouli , Alexander S Pym , Adrie J C Steyn , Deenan Pillay , Rachel A McKendry

Correction to: Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture.

BMC genomics

Avec: Camus Nimmo , Liam P Shaw , Ronan Doyle , Rachel Williams , Kayleen Brien , Carrie Burgess , Judith Breuer , Francois Balloux , Alexander S Pym

Increased Neutrophil Count and Decreased Neutrophil CD15 Expression Correlate With TB Disease Severity and Treatment Response Irrespective of HIV Co-infection.

Frontiers in immunology

Avec: Lerato N Ndlovu , Lauren Peetluk , Sashen Moodley , Shepherd Nhamoyebonde , Abigail T Ngoepe , Matilda Mazibuko , Khadija Khan , Farina Karim , Alexander S Pym , Fernanda Maruri , Mahomed-Yunus S Moosa , Yuri F van der Heijden , Timothy R Sterling , Alasdair Leslie

Evidence for Expanding the Role of Streptomycin in the Management of Drug-Resistant Mycobacterium tuberculosis.

Antimicrobial agents and chemotherapy

Avec: Keira A Cohen , Katharine E Stott , Vanisha Munsamy , Abigail L Manson , Ashlee M Earl , Alexander S Pym

Réseau de co-auteurs

Camus Nimmo 4 collaborations

Kayleen Brien 4 collaborations

Judith Breuer 3 collaborations

James Millard 3 collaborations

Shepherd Nhamoyebonde 3 collaborations

Farina Karim 3 collaborations

Alasdair Leslie 3 collaborations

Liam P Shaw 2 collaborations

Ronan Doyle 2 collaborations

Rachel Williams 2 collaborations

Carrie Burgess 2 collaborations

Francois Balloux 2 collaborations

Sashen Moodley 2 collaborations

Alison D Grant 2 collaborations

Nesri Padayatchi 2 collaborations

François Balloux 2 collaborations

Max O'Donnell 2 collaborations

Amanda Ardain 2 collaborations

Racquel Domingo-Gonzalez 2 collaborations

Shibali Das 2 collaborations

Samuel W Kazer 2 collaborations

Nicole C Howard 2 collaborations

Alveera Singh 2 collaborations

Mushtaq Ahmed 2 collaborations

Javier Rangel-Moreno 2 collaborations

Paul Ogongo 2 collaborations

Lan Lu 2 collaborations

Duran Ramsuran 2 collaborations

Maria de la Luz Garcia-Hernandez 2 collaborations

Tyler K Ulland 2 collaborations

Matthew Darby 2 collaborations

Eugene Park 2 collaborations

Laura Melocchi 2 collaborations

Rajhmun Madansein 2 collaborations

Kaylesh Jay Dullabh 2 collaborations

Micah Dunlap 2 collaborations

Nancy Marin-Agudelo 2 collaborations

Takashi Ebihara 2 collaborations

Thumbi Ndung'u 2 collaborations

Deepak Kaushal 2 collaborations

Jay K Kolls 2 collaborations

Adrie Steyn 2 collaborations

Joaquín Zúñiga 2 collaborations

William Horsnell 2 collaborations

Wayne M Yokoyama 2 collaborations

Alex K Shalek 2 collaborations

Henrik N Kløverpris 2 collaborations

Marco Colonna 2 collaborations

Shabaana A Khader 2 collaborations

Vanisha Munsamy 2 collaborations

Lucy van Dorp 1 collaboration

Allison Wolf 1 collaboration

Richard Goldstein 1 collaboration

Thuli Mthiyane 1 collaboration

John Adamson 1 collaboration

Yusentha Balakrishna 1 collaboration

Cathy Connolly 1 collaboration

Andrew Owen 1 collaboration

Roxana Rustomjee 1 collaboration

Keertan Dheda 1 collaboration

Helen McIlleron 1 collaboration

Harriet D Gliddon 1 collaboration

Dan Frampton 1 collaboration

Jude Heaney 1 collaboration

Thomas Pataillot-Meakin 1 collaboration

Eleni Nastouli 1 collaboration

Adrie J C Steyn 1 collaboration

Deenan Pillay 1 collaboration

Rachel A McKendry 1 collaboration

Lerato N Ndlovu 1 collaboration

Lauren Peetluk 1 collaboration

Abigail T Ngoepe 1 collaboration

Matilda Mazibuko 1 collaboration

Khadija Khan 1 collaboration

Fernanda Maruri 1 collaboration

Mahomed-Yunus S Moosa 1 collaboration

Yuri F van der Heijden 1 collaboration

Timothy R Sterling 1 collaboration

Keira A Cohen 1 collaboration

Katharine E Stott 1 collaboration

Abigail L Manson 1 collaboration

Ashlee M Earl 1 collaboration